OCA:7LP9

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Jmol JavaScript applet jmolApplet0__711558414781202__ initializing

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=7LP9"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

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FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7lp9)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7lp9

The Resolver thinks MMCif

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TITLE: Heat-dependent opening of TRPV1 in the presence of capsaicin.

6OU = [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate

LBN = 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

NA = SODIUM ION

T7X = Phosphatidylinositol

YFP = 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol

Setting space group name to HM:P 1

biomolecule 1 operators 1 ASYM_IDs A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA

7LP9

4 bonds added

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=7lp9): 7049 ms

reading 20977 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

20977 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 769 ms

TITLE: Heat-dependent opening of TRPV1 in the presence of capsaicin.

6OU = [(2~{R})-1-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-3-hexadecanoyloxy-propan-2-yl] (~{Z})-octadec-9-enoate

LBN = 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

NA = SODIUM ION

T7X = Phosphatidylinositol

YFP = 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol

found biomolecule 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA

7LP9

4 bonds added

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Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!