OCA:8U5E

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Jmol JavaScript applet jmolApplet0__132831562157786__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__132831562157786__)

vwrOptions:

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setting document base to "https://oca.weizmann.ac.il/oca-bin/ccpeek?id=8U5E"

Jmol Version: 16.2.17 2024-06-07 15:31

java.vendor: Java2Script (HTML5)

java.version: 2022-06-24 05:54:49 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

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processors available: 1

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Jmol getValue emulate null

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Jmol getValue bgcolor #FFFFFF

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Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

StatusManager APPLETREADYcallback set f=Jmol._readyCallback

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Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

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Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

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script 1 started

loadScript /oca-docs/jsmol/j2s/core/coretext.z.js

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antialiasDisplay = false

FileManager.getAtomSetCollectionFromFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=8u5e)

FileManager opening url https://oca.weizmann.ac.il/oca-bin/sendStructure?id=8u5e

The Resolver thinks MMCif

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loadScript /oca-docs/jsmol/j2s/JU/CifDataParser.js

loadScript /oca-docs/jsmol/j2s/core/corebio.z.js

TITLE: Structural Basis of Clostridium perfringens Enterotoxin Activation and Oligomerization by Trypsin.

Setting space group name to HM:P 21 21 21

ACT = ACETATE ION

GOL = GLYCEROL

HOH = WATER

SO4 = SULFATE ION

8U5E

biomolecule 1 operators 1 ASYM_IDs A,B,E,F,G,H,I,J,K,L,M,Z,AA

found biomolecule 1: A,B,E,F,G,H,I,J,K,L,M,Z,AA

biomolecule 2 operators 1 ASYM_IDs C,D,N,O,P,Q,R,S,T,U,V,W,X,Y,BA,CA

found biomolecule 2: C,D,N,O,P,Q,R,S,T,U,V,W,X,Y,BA,CA

loadScript /oca-docs/jsmol/j2s/core/coresym.z.js

SpaceGroup - 0 settings generated

Precision set to 4; packing set to 0.02

Time for openFile(https://oca.weizmann.ac.il/oca-bin/sendStructure?id=8u5e): 6288 ms

reading 4956 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

model 1.1 alternative locations: AB

Default Van der Waals type for model set to Babel

4956 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 250 ms

TITLE: Structural Basis of Clostridium perfringens Enterotoxin Activation and Oligomerization by Trypsin.

ACT = ACETATE ION

GOL = GLYCEROL

HOH = WATER

SO4 = SULFATE ION

8U5E

found biomolecule 1: A,B,E,F,G,H,I,J,K,L,M,Z,AA

found biomolecule 2: C,D,N,O,P,Q,R,S,T,U,V,W,X,Y,BA,CA

Precision set to 4; packing set to 0.02

loadScript /oca-docs/jsmol/j2s/J/thread/SpinThread.js

Script completed

Jmol script terminated

spinFPS is set too fast (30) -- can't keep up!