Analysis of interatomic Contacts of Structural Units in PDB entry:
10AL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10AL entry

There are 4 chains in PDB entry 10AL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 4	LEU 878
D	SER 4	LEU 878
B	SER 4	LEU 878
C	SER 4	LEU 878

There are171 helices in PDB entry 10AL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	4	13	Right-handed alpha
Helix 2	AA2	A	22	27	Right-handed alpha
Helix 3	AA3	A	41	53	Right-handed alpha
Helix 4	AA4	A	60	73	Right-handed alpha
Helix 5	AA5	A	77	92	Right-handed alpha
Helix 6	AA6	A	122	130	Right-handed alpha
Helix 7	AA7	A	132	142	Right-handed alpha
Helix 8	AA8	A	148	152	Right-handed 310
Helix 9	AA9	A	171	183	Right-handed alpha
Helix 10	AB1	A	186	199	Right-handed alpha
Helix 11	AB2	A	201	211	Right-handed alpha
Helix 12	AB3	A	218	222	Right-handed 310
Helix 13	AB4	A	230	236	Right-handed alpha
Helix 14	AB5	A	237	252	Right-handed alpha
Helix 15	AB6	A	256	294	Right-handed alpha
Helix 16	AB7	A	297	312	Right-handed alpha
Helix 17	AB8	A	319	338	Right-handed alpha
Helix 18	AB9	A	347	362	Right-handed alpha
Helix 19	AC1	A	366	384	Right-handed alpha
Helix 20	AC2	A	389	397	Right-handed alpha
Helix 21	AC3	A	419	432	Right-handed alpha
Helix 22	AC4	A	448	461	Right-handed alpha
Helix 23	AC5	A	471	482	Right-handed alpha
Helix 24	AC6	A	483	486	Right-handed 310
Helix 25	AC7	A	488	494	Right-handed alpha
Helix 26	AC8	A	520	529	Right-handed alpha
Helix 27	AC9	A	549	583	Right-handed alpha
Helix 28	AD1	A	586	591	Right-handed alpha
Helix 29	AD2	A	594	599	Right-handed alpha
Helix 30	AD3	A	601	605	Right-handed 310
Helix 31	AD4	A	619	634	Right-handed alpha
Helix 32	AD5	A	641	651	Right-handed alpha
Helix 33	AD6	A	672	677	Right-handed alpha
Helix 34	AD7	A	679	688	Right-handed alpha
Helix 35	AD8	A	696	716	Right-handed alpha
Helix 36	AD9	A	734	742	Right-handed alpha
Helix 37	AE1	A	770	779	Right-handed alpha
Helix 38	AE2	A	797	801	Right-handed 310
Helix 39	AE3	A	802	819	Right-handed alpha
Helix 40	AE4	A	830	840	Right-handed alpha
Helix 41	AE5	A	841	845	Right-handed 310
Helix 42	AE6	A	862	872	Right-handed alpha
Helix 43	AE7	D	5	13	Right-handed alpha
Helix 44	AE8	D	23	27	Right-handed 310
Helix 45	AE9	D	41	53	Right-handed alpha
Helix 46	AF1	D	60	73	Right-handed alpha
Helix 47	AF2	D	77	92	Right-handed alpha
Helix 48	AF3	D	122	130	Right-handed alpha
Helix 49	AF4	D	132	142	Right-handed alpha
Helix 50	AF5	D	148	152	Right-handed 310
Helix 51	AF6	D	171	183	Right-handed alpha
Helix 52	AF7	D	186	199	Right-handed alpha
Helix 53	AF8	D	201	211	Right-handed alpha
Helix 54	AF9	D	230	236	Right-handed alpha
Helix 55	AG1	D	237	252	Right-handed alpha
Helix 56	AG2	D	256	294	Right-handed alpha
Helix 57	AG3	D	297	312	Right-handed alpha
Helix 58	AG4	D	319	337	Right-handed alpha
Helix 59	AG5	D	347	362	Right-handed alpha
Helix 60	AG6	D	366	384	Right-handed alpha
Helix 61	AG7	D	389	397	Right-handed alpha
Helix 62	AG8	D	419	432	Right-handed alpha
Helix 63	AG9	D	448	461	Right-handed alpha
Helix 64	AH1	D	471	482	Right-handed alpha
Helix 65	AH2	D	483	486	Right-handed 310
Helix 66	AH3	D	488	494	Right-handed alpha
Helix 67	AH4	D	520	529	Right-handed alpha
Helix 68	AH5	D	549	583	Right-handed alpha
Helix 69	AH6	D	586	591	Right-handed alpha
Helix 70	AH7	D	594	599	Right-handed alpha
Helix 71	AH8	D	601	605	Right-handed 310
Helix 72	AH9	D	619	634	Right-handed alpha
Helix 73	AI1	D	641	651	Right-handed alpha
Helix 74	AI2	D	652	655	Right-handed 310
Helix 75	AI3	D	657	662	Right-handed 310
Helix 76	AI4	D	672	677	Right-handed alpha
Helix 77	AI5	D	679	689	Right-handed alpha
Helix 78	AI6	D	696	717	Right-handed alpha
Helix 79	AI7	D	734	741	Right-handed alpha
Helix 80	AI8	D	770	779	Right-handed alpha
Helix 81	AI9	D	797	800	Right-handed 310
Helix 82	AJ1	D	801	819	Right-handed alpha
Helix 83	AJ2	D	830	840	Right-handed alpha
Helix 84	AJ3	D	841	844	Right-handed 310
Helix 85	AJ4	D	862	872	Right-handed alpha
Helix 86	AJ5	B	5	13	Right-handed alpha
Helix 87	AJ6	B	22	27	Right-handed alpha
Helix 88	AJ7	B	41	53	Right-handed alpha
Helix 89	AJ8	B	60	73	Right-handed alpha
Helix 90	AJ9	B	77	92	Right-handed alpha
Helix 91	AK1	B	122	131	Right-handed alpha
Helix 92	AK2	B	132	142	Right-handed alpha
Helix 93	AK3	B	148	152	Right-handed 310
Helix 94	AK4	B	168	170	Right-handed 310
Helix 95	AK5	B	171	184	Right-handed alpha
Helix 96	AK6	B	186	199	Right-handed alpha
Helix 97	AK7	B	201	211	Right-handed alpha
Helix 98	AK8	B	230	236	Right-handed alpha
Helix 99	AK9	B	237	252	Right-handed alpha
Helix 100	AL1	B	256	294	Right-handed alpha
Helix 101	AL2	B	297	312	Right-handed alpha
Helix 102	AL3	B	319	338	Right-handed alpha
Helix 103	AL4	B	347	362	Right-handed alpha
Helix 104	AL5	B	366	384	Right-handed alpha
Helix 105	AL6	B	389	397	Right-handed alpha
Helix 106	AL7	B	419	432	Right-handed alpha
Helix 107	AL8	B	448	461	Right-handed alpha
Helix 108	AL9	B	471	482	Right-handed alpha
Helix 109	AM1	B	483	486	Right-handed 310
Helix 110	AM2	B	488	494	Right-handed alpha
Helix 111	AM3	B	520	529	Right-handed alpha
Helix 112	AM4	B	549	583	Right-handed alpha
Helix 113	AM5	B	586	591	Right-handed alpha
Helix 114	AM6	B	594	599	Right-handed alpha
Helix 115	AM7	B	601	605	Right-handed 310
Helix 116	AM8	B	619	635	Right-handed alpha
Helix 117	AM9	B	641	651	Right-handed alpha
Helix 118	AN1	B	652	655	Right-handed 310
Helix 119	AN2	B	657	662	Right-handed 310
Helix 120	AN3	B	672	677	Right-handed alpha
Helix 121	AN4	B	679	688	Right-handed alpha
Helix 122	AN5	B	696	717	Right-handed alpha
Helix 123	AN6	B	734	741	Right-handed alpha
Helix 124	AN7	B	770	779	Right-handed alpha
Helix 125	AN8	B	801	819	Right-handed alpha
Helix 126	AN9	B	830	840	Right-handed alpha
Helix 127	AO1	B	841	845	Right-handed 310
Helix 128	AO2	B	862	872	Right-handed alpha
Helix 129	AO3	C	5	12	Right-handed alpha
Helix 130	AO4	C	22	27	Right-handed alpha
Helix 131	AO5	C	41	53	Right-handed alpha
Helix 132	AO6	C	60	73	Right-handed alpha
Helix 133	AO7	C	77	92	Right-handed alpha
Helix 134	AO8	C	122	130	Right-handed alpha
Helix 135	AO9	C	132	142	Right-handed alpha
Helix 136	AP1	C	148	152	Right-handed 310
Helix 137	AP2	C	169	184	Right-handed alpha
Helix 138	AP3	C	186	199	Right-handed alpha
Helix 139	AP4	C	201	211	Right-handed alpha
Helix 140	AP5	C	218	222	Right-handed 310
Helix 141	AP6	C	230	236	Right-handed alpha
Helix 142	AP7	C	237	252	Right-handed alpha
Helix 143	AP8	C	256	294	Right-handed alpha
Helix 144	AP9	C	297	312	Right-handed alpha
Helix 145	AQ1	C	319	338	Right-handed alpha
Helix 146	AQ2	C	347	362	Right-handed alpha
Helix 147	AQ3	C	366	384	Right-handed alpha
Helix 148	AQ4	C	389	397	Right-handed alpha
Helix 149	AQ5	C	419	432	Right-handed alpha
Helix 150	AQ6	C	448	461	Right-handed alpha
Helix 151	AQ7	C	471	482	Right-handed alpha
Helix 152	AQ8	C	483	486	Right-handed 310
Helix 153	AQ9	C	488	494	Right-handed alpha
Helix 154	AR1	C	520	529	Right-handed alpha
Helix 155	AR2	C	549	583	Right-handed alpha
Helix 156	AR3	C	586	591	Right-handed alpha
Helix 157	AR4	C	594	599	Right-handed alpha
Helix 158	AR5	C	601	605	Right-handed 310
Helix 159	AR6	C	619	634	Right-handed alpha
Helix 160	AR7	C	641	651	Right-handed alpha
Helix 161	AR8	C	652	655	Right-handed 310
Helix 162	AR9	C	672	677	Right-handed alpha
Helix 163	AS1	C	679	688	Right-handed alpha
Helix 164	AS2	C	696	717	Right-handed alpha
Helix 165	AS3	C	734	742	Right-handed alpha
Helix 166	AS4	C	770	780	Right-handed alpha
Helix 167	AS5	C	797	801	Right-handed 310
Helix 168	AS6	C	802	819	Right-handed alpha
Helix 169	AS7	C	830	840	Right-handed alpha
Helix 170	AS8	C	841	844	Right-handed 310
Helix 171	AS9	C	862	872	Right-handed alpha

There are 24 sheets in PDB entry 10AL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	17	18	first strand
Strand 2	A	874	875	parallel
Strand 3	A	792	795	parallel
Strand 4	A	823	828	parallel
Strand 5	A	467	470	anti-parallel
Strand 6	A	438	443	parallel
Strand 7	A	403	407	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	158	161	first strand
Strand 2	A	165	168	anti-parallel
Strand 3	A	57	58	parallel
Strand 4	A	113	115	parallel
Strand 5	A	385	386	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	495	497	first strand
Strand 2	A	503	505	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	517	519	first strand
Strand 2	A	614	618	parallel
Strand 3	A	726	727	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	848	850	first strand
Strand 2	A	855	857	anti-parallel

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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	17	18	first strand
Strand 2	D	874	875	parallel
Strand 3	D	792	795	parallel
Strand 4	D	823	828	parallel
Strand 5	D	467	470	anti-parallel
Strand 6	D	438	443	parallel
Strand 7	D	403	407	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	167	first strand
Strand 2	D	57	58	parallel
Strand 3	D	113	115	parallel
Strand 4	D	385	386	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	227	first strand
Strand 2	D	341	343	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	495	497	first strand
Strand 2	D	503	505	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	517	519	first strand
Strand 2	D	614	618	parallel
Strand 3	D	726	727	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	848	850	first strand
Strand 2	D	855	857	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	17	18	first strand
Strand 2	B	874	875	parallel
Strand 3	B	792	795	parallel
Strand 4	B	823	828	parallel
Strand 5	B	467	470	anti-parallel
Strand 6	B	438	443	parallel
Strand 7	B	403	407	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	115	first strand
Strand 2	B	385	386	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	225	227	first strand
Strand 2	B	341	343	parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	495	497	first strand
Strand 2	B	503	505	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	518	519	first strand
Strand 2	B	617	618	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	614	615	first strand
Strand 2	B	726	727	parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	848	850	first strand
Strand 2	B	855	857	anti-parallel

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There are 7 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	17	18	first strand
Strand 2	C	874	875	parallel
Strand 3	C	792	795	parallel
Strand 4	C	823	828	parallel
Strand 5	C	467	470	anti-parallel
Strand 6	C	438	443	parallel
Strand 7	C	403	407	parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	158	161	first strand
Strand 2	C	165	168	anti-parallel
Strand 3	C	57	58	parallel
Strand 4	C	113	115	parallel
Strand 5	C	385	386	parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	227	first strand
Strand 2	C	341	343	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	495	497	first strand
Strand 2	C	503	505	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	517	519	first strand
Strand 2	C	614	618	parallel
Strand 3	C	726	727	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	848	850	first strand
Strand 2	C	855	857	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10AL

Analysis of interatomic Contacts of Structural Units in PDB entry:
10AL