Analysis of interatomic Contacts of Structural Units in PDB entry:
10EC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10EC entry

There is 1 chain in PDB entry 10EC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 3PRO 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 10EC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 28Right-handed alpha
Helix 2
AA2
A
28 35Right-handed alpha
Helix 3
AA3
A
36 39Right-handed 310
Helix 4
AA4
A
50 63Right-handed alpha
Helix 5
AA5
A
68 82Right-handed alpha
Helix 6
AA6
A
91 93Right-handed 310
Helix 7
AA7
A
94 101Right-handed alpha
Helix 8
AA8
A
107 123Right-handed alpha
Helix 9
AA9
A
273 296Right-handed alpha
Helix 10
AB1
A
308 315Right-handed alpha
Helix 11
AB2
A
316 319Right-handed 310
Helix 12
AB3
A
345 361Right-handed alpha
Helix 13
AB4
A
374 411Right-handed alpha
Helix 14
AB5
A
431 444Right-handed alpha
Helix 15
AB6
A
448 460Right-handed alpha
Helix 16
AB7
A
469 478Right-handed alpha
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There are 3 sheets in PDB entry 10EC. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 161first strand
Strand 2
A
124 130anti-parallel
Strand 3
A
256 260anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 172first strand
Strand 2
A
175 186anti-parallel
Strand 3
A
199 207anti-parallel
Strand 4
A
215 220anti-parallel
Strand 5
A
236 241anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
301 305first strand
Strand 2
A
335 339anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il