Analysis of interatomic Contacts of Structural Units in PDB entry:
10ED


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10ED entry

There are 2 chains in PDB entry 10ED (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 TYR 2GLN 52
A
 MET 1SER 596
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 10ED. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
X
2 18Right-handed alpha
Helix 2
AA2
X
19 25Right-handed 310
Helix 3
AA3
X
33 52Right-handed alpha
Helix 4
AA4
A
6 30Right-handed alpha
Helix 5
AA5
A
34 39Right-handed alpha
Helix 6
AA6
A
40 48Right-handed alpha
Helix 7
AA7
A
49 52Right-handed 310
Helix 8
AA8
A
53 58Right-handed alpha
Helix 9
AA9
A
58 68Right-handed alpha
Helix 10
AB1
A
71 84Right-handed alpha
Helix 11
AB2
A
88 100Right-handed alpha
Helix 12
AB3
A
103 113Right-handed alpha
Helix 13
AB4
A
114 149Right-handed alpha
Helix 14
AB5
A
153 173Right-handed alpha
Helix 15
AB6
A
182 211Right-handed alpha
Helix 16
AB7
A
214 225Right-handed alpha
Helix 17
AB8
A
225 233Right-handed alpha
Helix 18
AB9
A
237 255Right-handed alpha
Helix 19
AC1
A
255 263Right-handed alpha
Helix 20
AC2
A
270 301Right-handed alpha
Helix 21
AC3
A
305 307Right-handed 310
Helix 22
AC4
A
308 317Right-handed alpha
Helix 23
AC5
A
319 353Right-handed alpha
Helix 24
AC6
A
365 392Right-handed alpha
Helix 25
AC7
A
397 411Right-handed alpha
Helix 26
AC8
A
412 422Right-handed alpha
Helix 27
AC9
A
426 445Right-handed alpha
Helix 28
AD1
A
445 452Right-handed alpha
Helix 29
AD2
A
470 494Right-handed alpha
Helix 30
AD3
A
497 507Right-handed alpha
Helix 31
AD4
A
524 533Right-handed alpha
Helix 32
AD5
A
537 553Right-handed alpha
Helix 33
AD6
A
560 580Right-handed alpha
Helix 34
AD7
A
580 592Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 10ED.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
455 458first strand
Strand 2
A
463 466anti-parallel
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