Analysis of interatomic Contacts of Structural Units in PDB entry:
10EO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10EO entry

There are 2 chains in PDB entry 10EO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 108	ASN 915
B	GLY 108	ASN 915

There are 30 helices in PDB entry 10EO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	114	122	Right-handed alpha
Helix 2	AA2	A	148	153	Right-handed alpha
Helix 3	AA3	A	315	327	Right-handed alpha
Helix 4	AA4	A	374	378	Right-handed 310
Helix 5	AA5	A	645	649	Right-handed 310
Helix 6	AA6	A	697	702	Right-handed alpha
Helix 7	AA7	A	718	726	Right-handed 310
Helix 8	AA8	A	744	747	Right-handed 310
Helix 9	AA9	A	748	756	Right-handed alpha
Helix 10	AB1	A	757	767	Right-handed alpha
Helix 11	AB2	A	781	794	Right-handed alpha
Helix 12	AB3	A	827	834	Right-handed alpha
Helix 13	AB4	A	839	843	Right-handed 310
Helix 14	AB5	A	861	875	Right-handed alpha
Helix 15	AB6	A	893	912	Right-handed alpha
Helix 16	AB7	B	114	122	Right-handed alpha
Helix 17	AB8	B	148	153	Right-handed alpha
Helix 18	AB9	B	315	327	Right-handed alpha
Helix 19	AC1	B	374	378	Right-handed 310
Helix 20	AC2	B	645	649	Right-handed 310
Helix 21	AC3	B	697	702	Right-handed alpha
Helix 22	AC4	B	718	726	Right-handed 310
Helix 23	AC5	B	744	747	Right-handed 310
Helix 24	AC6	B	748	756	Right-handed alpha
Helix 25	AC7	B	757	767	Right-handed alpha
Helix 26	AC8	B	781	794	Right-handed alpha
Helix 27	AC9	B	827	834	Right-handed alpha
Helix 28	AD1	B	839	843	Right-handed 310
Helix 29	AD2	B	861	875	Right-handed alpha
Helix 30	AD3	B	893	912	Right-handed alpha

There are 24 sheets in PDB entry 10EO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	137	142	anti-parallel
Strand 3	A	179	184	anti-parallel
Strand 4	A	195	196	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	162	165	anti-parallel
Strand 3	A	170	171	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	205	211	first strand
Strand 2	A	217	223	anti-parallel
Strand 3	A	234	239	anti-parallel
Strand 4	A	245	247	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	263	265	first strand
Strand 2	A	270	275	anti-parallel
Strand 3	A	328	334	anti-parallel
Strand 4	A	339	346	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	297	first strand
Strand 2	B	879	884	anti-parallel
Strand 3	B	847	852	parallel
Strand 4	B	800	804	parallel
Strand 5	B	770	779	parallel
Strand 6	B	684	690	parallel
Strand 7	B	728	731	parallel
Strand 8	B	665	672	anti-parallel
Strand 9	B	652	659	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	353	first strand
Strand 2	A	359	365	anti-parallel
Strand 3	A	380	386	anti-parallel
Strand 4	A	391	398	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	415	420	first strand
Strand 2	A	427	433	anti-parallel
Strand 3	A	447	453	anti-parallel
Strand 4	A	463	468	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	471	479	first strand
Strand 2	A	482	489	anti-parallel
Strand 3	A	494	500	anti-parallel
Strand 4	A	510	516	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	526	527	first strand
Strand 2	A	551	559	anti-parallel
Strand 3	A	564	572	anti-parallel
Strand 4	A	578	583	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	531	first strand
Strand 2	A	537	539	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	543	first strand
Strand 2	A	605	606	parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	592	596	first strand
Strand 2	A	611	616	anti-parallel
Strand 3	A	624	629	anti-parallel
Strand 4	A	634	637	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	659	first strand
Strand 2	A	665	672	anti-parallel
Strand 3	A	728	731	anti-parallel
Strand 4	A	684	690	parallel
Strand 5	A	770	779	parallel
Strand 6	A	800	804	parallel
Strand 7	A	847	852	parallel
Strand 8	A	879	884	parallel
Strand 9	B	294	297	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	137	142	anti-parallel
Strand 3	B	179	184	anti-parallel
Strand 4	B	195	196	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	162	165	anti-parallel
Strand 3	B	170	171	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	205	211	first strand
Strand 2	B	217	223	anti-parallel
Strand 3	B	234	239	anti-parallel
Strand 4	B	245	247	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	263	265	first strand
Strand 2	B	270	275	anti-parallel
Strand 3	B	328	334	anti-parallel
Strand 4	B	339	346	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	353	first strand
Strand 2	B	359	365	anti-parallel
Strand 3	B	380	386	anti-parallel
Strand 4	B	391	398	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	415	420	first strand
Strand 2	B	427	433	anti-parallel
Strand 3	B	447	453	anti-parallel
Strand 4	B	463	468	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	471	479	first strand
Strand 2	B	482	489	anti-parallel
Strand 3	B	494	500	anti-parallel
Strand 4	B	510	516	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	526	527	first strand
Strand 2	B	551	559	anti-parallel
Strand 3	B	564	572	anti-parallel
Strand 4	B	578	583	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	531	first strand
Strand 2	B	537	539	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	542	543	first strand
Strand 2	B	605	606	parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	592	596	first strand
Strand 2	B	611	616	anti-parallel
Strand 3	B	624	629	anti-parallel
Strand 4	B	634	637	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10EO

Analysis of interatomic Contacts of Structural Units in PDB entry:
10EO