Analysis of interatomic Contacts of Structural Units in PDB entry:
10EU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10EU entry

There are 2 chains in PDB entry 10EU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 109	ASN 915
B	GLY 109	ASN 915

There are 26 helices in PDB entry 10EU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	114	122	Right-handed alpha
Helix 2	AA2	A	148	153	Right-handed alpha
Helix 3	AA3	A	315	326	Right-handed alpha
Helix 4	AA4	A	374	378	Right-handed 310
Helix 5	AA5	A	718	726	Right-handed 310
Helix 6	AA6	A	745	747	Right-handed 310
Helix 7	AA7	A	748	768	Right-handed alpha
Helix 8	AA8	A	782	794	Right-handed alpha
Helix 9	AA9	A	827	835	Right-handed alpha
Helix 10	AB1	A	836	843	Right-handed 310
Helix 11	AB2	A	862	865	Right-handed 310
Helix 12	AB3	A	866	875	Right-handed alpha
Helix 13	AB4	A	894	911	Right-handed alpha
Helix 14	AB5	B	114	122	Right-handed alpha
Helix 15	AB6	B	148	153	Right-handed alpha
Helix 16	AB7	B	315	326	Right-handed alpha
Helix 17	AB8	B	374	378	Right-handed 310
Helix 18	AB9	B	718	726	Right-handed 310
Helix 19	AC1	B	745	747	Right-handed 310
Helix 20	AC2	B	748	768	Right-handed alpha
Helix 21	AC3	B	782	794	Right-handed alpha
Helix 22	AC4	B	827	835	Right-handed alpha
Helix 23	AC5	B	836	843	Right-handed 310
Helix 24	AC6	B	862	865	Right-handed 310
Helix 25	AC7	B	866	875	Right-handed alpha
Helix 26	AC8	B	894	911	Right-handed alpha

There are 28 sheets in PDB entry 10EU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	128	131	first strand
Strand 2	A	137	141	anti-parallel
Strand 3	A	180	184	anti-parallel
Strand 4	A	195	196	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	157	159	first strand
Strand 2	A	162	165	anti-parallel
Strand 3	A	170	171	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	220	222	first strand
Strand 2	A	234	238	anti-parallel
Strand 3	A	245	247	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	270	275	first strand
Strand 2	A	329	334	anti-parallel
Strand 3	A	339	341	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	294	297	first strand
Strand 2	B	879	884	anti-parallel
Strand 3	B	847	852	parallel
Strand 4	B	801	804	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	348	353	first strand
Strand 2	A	359	365	anti-parallel
Strand 3	A	380	386	anti-parallel
Strand 4	A	393	398	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	417	420	first strand
Strand 2	A	428	433	anti-parallel
Strand 3	A	447	452	anti-parallel
Strand 4	A	463	466	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	479	first strand
Strand 2	A	482	489	anti-parallel
Strand 3	A	494	500	anti-parallel
Strand 4	A	510	514	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	529	531	first strand
Strand 2	A	537	539	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	542	543	first strand
Strand 2	A	605	606	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	551	558	first strand
Strand 2	A	565	572	anti-parallel
Strand 3	A	580	583	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	589	590	first strand
Strand 2	A	611	618	anti-parallel
Strand 3	A	593	596	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	589	590	first strand
Strand 2	A	611	618	anti-parallel
Strand 3	A	624	629	anti-parallel
Strand 4	A	635	637	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	659	first strand
Strand 2	A	665	672	anti-parallel
Strand 3	A	728	731	anti-parallel
Strand 4	A	684	689	parallel
Strand 5	A	770	777	parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	801	804	first strand
Strand 2	A	847	852	parallel
Strand 3	A	879	884	parallel
Strand 4	B	294	297	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	128	131	first strand
Strand 2	B	137	141	anti-parallel
Strand 3	B	180	184	anti-parallel
Strand 4	B	195	196	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	157	159	first strand
Strand 2	B	162	165	anti-parallel
Strand 3	B	170	171	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	220	222	first strand
Strand 2	B	234	238	anti-parallel
Strand 3	B	245	247	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	270	275	first strand
Strand 2	B	329	334	anti-parallel
Strand 3	B	339	341	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	348	353	first strand
Strand 2	B	359	365	anti-parallel
Strand 3	B	380	386	anti-parallel
Strand 4	B	393	398	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	417	420	first strand
Strand 2	B	428	433	anti-parallel
Strand 3	B	447	452	anti-parallel
Strand 4	B	463	466	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	476	479	first strand
Strand 2	B	482	489	anti-parallel
Strand 3	B	494	500	anti-parallel
Strand 4	B	510	514	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	529	531	first strand
Strand 2	B	537	539	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	542	543	first strand
Strand 2	B	605	606	parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	551	558	first strand
Strand 2	B	565	572	anti-parallel
Strand 3	B	580	583	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	589	590	first strand
Strand 2	B	611	618	anti-parallel
Strand 3	B	593	596	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	589	590	first strand
Strand 2	B	611	618	anti-parallel
Strand 3	B	624	629	anti-parallel
Strand 4	B	635	637	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	652	659	first strand
Strand 2	B	665	672	anti-parallel
Strand 3	B	728	731	anti-parallel
Strand 4	B	684	689	parallel
Strand 5	B	770	777	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10EU

Analysis of interatomic Contacts of Structural Units in PDB entry:
10EU