Analysis of interatomic Contacts of Structural Units in PDB entry:
10EX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10EX entry

There are 8 chains in PDB entry 10EX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	ALA 841
B	PHE 59	GLN 845
C	LYS 25	ALA 841
D	PHE 59	GLN 845
E	ASP 1	LYS 107
F	GLU 1	ALA 115
I	ASP 1	LYS 107
J	GLU 1	ALA 115

There are105 helices in PDB entry 10EX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	52	Right-handed alpha
Helix 2	AA2	A	71	77	Right-handed alpha
Helix 3	AA3	A	105	114	Right-handed alpha
Helix 4	AA4	A	145	159	Right-handed alpha
Helix 5	AA5	A	170	187	Right-handed alpha
Helix 6	AA6	A	205	214	Right-handed alpha
Helix 7	AA7	A	224	238	Right-handed alpha
Helix 8	AA8	A	250	255	Right-handed alpha
Helix 9	AA9	A	257	262	Right-handed alpha
Helix 10	AB1	A	276	285	Right-handed alpha
Helix 11	AB2	A	287	296	Right-handed alpha
Helix 12	AB3	A	316	328	Right-handed alpha
Helix 13	AB4	A	457	471	Right-handed alpha
Helix 14	AB5	A	500	507	Right-handed alpha
Helix 15	AB6	A	520	527	Right-handed alpha
Helix 16	AB7	A	559	581	Right-handed alpha
Helix 17	AB8	A	603	615	Right-handed alpha
Helix 18	AB9	A	626	658	Right-handed alpha
Helix 19	AC1	A	665	669	Right-handed 310
Helix 20	AC2	A	687	696	Right-handed alpha
Helix 21	AC3	A	700	710	Right-handed alpha
Helix 22	AC4	A	713	723	Right-handed alpha
Helix 23	AC5	A	733	740	Right-handed alpha
Helix 24	AC6	A	770	775	Right-handed alpha
Helix 25	AC7	A	814	841	Right-handed alpha
Helix 26	AC8	B	77	91	Right-handed alpha
Helix 27	AC9	B	105	120	Right-handed alpha
Helix 28	AD1	B	127	132	Right-handed alpha
Helix 29	AD2	B	149	163	Right-handed alpha
Helix 30	AD3	B	178	191	Right-handed alpha
Helix 31	AD4	B	217	223	Right-handed alpha
Helix 32	AD5	B	233	241	Right-handed alpha
Helix 33	AD6	B	246	251	Right-handed alpha
Helix 34	AD7	B	288	306	Right-handed alpha
Helix 35	AD8	B	330	340	Right-handed alpha
Helix 36	AD9	B	459	473	Right-handed alpha
Helix 37	AE1	B	489	493	Right-handed 310
Helix 38	AE2	B	495	503	Right-handed alpha
Helix 39	AE3	B	548	552	Right-handed 310
Helix 40	AE4	B	555	579	Right-handed alpha
Helix 41	AE5	B	601	614	Right-handed alpha
Helix 42	AE6	B	625	655	Right-handed alpha
Helix 43	AE7	B	668	673	Right-handed alpha
Helix 44	AE8	B	689	698	Right-handed alpha
Helix 45	AE9	B	700	706	Right-handed alpha
Helix 46	AF1	B	713	723	Right-handed alpha
Helix 47	AF2	B	733	742	Right-handed alpha
Helix 48	AF3	B	773	786	Right-handed alpha
Helix 49	AF4	B	787	796	Right-handed alpha
Helix 50	AF5	B	819	845	Right-handed alpha
Helix 51	AF6	C	35	49	Right-handed alpha
Helix 52	AF7	C	70	82	Right-handed alpha
Helix 53	AF8	C	83	85	Right-handed 310
Helix 54	AF9	C	99	103	Right-handed 310
Helix 55	AG1	C	104	115	Right-handed alpha
Helix 56	AG2	C	125	129	Right-handed 310
Helix 57	AG3	C	143	145	Right-handed 310
Helix 58	AG4	C	146	159	Right-handed alpha
Helix 59	AG5	C	170	188	Right-handed alpha
Helix 60	AG6	C	204	214	Right-handed alpha
Helix 61	AG7	C	224	238	Right-handed alpha
Helix 62	AG8	C	250	255	Right-handed alpha
Helix 63	AG9	C	257	262	Right-handed alpha
Helix 64	AH1	C	276	296	Right-handed alpha
Helix 65	AH2	C	316	328	Right-handed alpha
Helix 66	AH3	C	458	471	Right-handed alpha
Helix 67	AH4	C	499	507	Right-handed alpha
Helix 68	AH5	C	520	525	Right-handed alpha
Helix 69	AH6	C	559	584	Right-handed alpha
Helix 70	AH7	C	604	615	Right-handed alpha
Helix 71	AH8	C	626	657	Right-handed alpha
Helix 72	AH9	C	669	674	Right-handed alpha
Helix 73	AI1	C	687	696	Right-handed alpha
Helix 74	AI2	C	698	702	Right-handed 310
Helix 75	AI3	C	703	709	Right-handed alpha
Helix 76	AI4	C	713	723	Right-handed alpha
Helix 77	AI5	C	771	779	Right-handed alpha
Helix 78	AI6	C	784	789	Right-handed alpha
Helix 79	AI7	C	814	841	Right-handed alpha
Helix 80	AI8	D	77	92	Right-handed alpha
Helix 81	AI9	D	106	120	Right-handed alpha
Helix 82	AJ1	D	151	162	Right-handed alpha
Helix 83	AJ2	D	178	191	Right-handed alpha
Helix 84	AJ3	D	217	223	Right-handed alpha
Helix 85	AJ4	D	233	243	Right-handed alpha
Helix 86	AJ5	D	288	308	Right-handed alpha
Helix 87	AJ6	D	330	340	Right-handed alpha
Helix 88	AJ7	D	343	347	Right-handed 310
Helix 89	AJ8	D	459	473	Right-handed alpha
Helix 90	AJ9	D	489	493	Right-handed 310
Helix 91	AK1	D	498	503	Right-handed alpha
Helix 92	AK2	D	555	578	Right-handed alpha
Helix 93	AK3	D	602	614	Right-handed alpha
Helix 94	AK4	D	625	656	Right-handed alpha
Helix 95	AK5	D	668	673	Right-handed alpha
Helix 96	AK6	D	689	699	Right-handed alpha
Helix 97	AK7	D	701	707	Right-handed alpha
Helix 98	AK8	D	713	724	Right-handed alpha
Helix 99	AK9	D	733	742	Right-handed alpha
Helix 100	AL1	D	772	786	Right-handed alpha
Helix 101	AL2	D	787	797	Right-handed alpha
Helix 102	AL3	D	814	819	Right-handed alpha
Helix 103	AL4	D	820	845	Right-handed alpha
Helix 104	AL5	E	28	32	Right-handed 310
Helix 105	AL6	I	28	32	Right-handed 310

There are 32 sheets in PDB entry 10EX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	60	65	first strand
Strand 2	A	27	32	parallel
Strand 3	A	90	92	parallel
Strand 4	A	118	120	parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	196	197	first strand
Strand 2	A	164	168	parallel
Strand 3	A	218	222	parallel
Strand 4	A	246	248	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	270	first strand
Strand 2	A	351	357	anti-parallel
Strand 3	A	360	367	anti-parallel
Strand 4	A	372	374	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	436	437	first strand
Strand 2	A	452	453	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	528	529	first strand
Strand 2	A	761	762	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	729	732	first strand
Strand 2	A	538	543	anti-parallel
Strand 3	A	746	749	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	123	125	first strand
Strand 2	B	143	145	parallel

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There are 7 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	170	173	first strand
Strand 2	B	228	231	parallel
Strand 3	B	256	258	parallel
Strand 4	B	278	282	parallel
Strand 5	B	362	366	anti-parallel
Strand 6	B	374	380	anti-parallel
Strand 7	B	383	385	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	410	first strand
Strand 2	B	477	480	parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	729	731	first strand
Strand 2	B	530	539	anti-parallel
Strand 3	B	748	751	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	729	731	first strand
Strand 2	B	530	539	anti-parallel
Strand 3	B	757	762	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	541	542	first strand
Strand 2	B	659	660	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	60	66	first strand
Strand 2	C	27	33	parallel
Strand 3	C	89	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

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There are 8 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	197	first strand
Strand 2	C	164	168	parallel
Strand 3	C	218	222	parallel
Strand 4	C	246	249	parallel
Strand 5	C	267	270	parallel
Strand 6	C	351	356	anti-parallel
Strand 7	C	361	367	anti-parallel
Strand 8	C	372	374	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	513	parallel
Strand 4	C	761	762	anti-parallel
Strand 5	C	528	529	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	409	413	first strand
Strand 2	C	453	457	anti-parallel
Strand 3	C	434	436	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	534	536	first strand
Strand 2	C	756	758	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	538	539	first strand
Strand 2	C	731	732	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	97	99	first strand
Strand 2	D	123	125	parallel
Strand 3	D	143	145	parallel

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There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	173	first strand
Strand 2	D	228	231	parallel
Strand 3	D	256	257	parallel
Strand 4	D	277	282	parallel
Strand 5	D	362	366	anti-parallel
Strand 6	D	374	379	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	436	437	first strand
Strand 2	D	475	480	parallel
Strand 3	D	405	410	parallel
Strand 4	D	508	509	parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	419	first strand
Strand 2	D	457	458	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	439	440	first strand
Strand 2	D	451	452	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	730	732	first strand
Strand 2	D	530	539	anti-parallel
Strand 3	D	749	751	anti-parallel

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There are 3 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	730	732	first strand
Strand 2	D	530	539	anti-parallel
Strand 3	D	757	762	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	4	7	first strand
Strand 2	E	19	25	anti-parallel
Strand 3	E	72	75	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	34	37	first strand
Strand 2	E	86	89	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	5	6	first strand
Strand 2	F	22	23	anti-parallel

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There are 6 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	10	12	first strand
Strand 2	F	109	113	parallel
Strand 3	F	91	95	anti-parallel
Strand 4	F	34	39	anti-parallel
Strand 5	F	47	51	anti-parallel
Strand 6	F	58	59	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	5	first strand
Strand 2	I	19	25	anti-parallel
Strand 3	I	71	75	anti-parallel

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There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	12	first strand
Strand 2	I	102	105	parallel
Strand 3	I	85	86	anti-parallel

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There are 6 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	9	12	first strand
Strand 2	J	109	113	parallel
Strand 3	J	91	96	anti-parallel
Strand 4	J	34	39	anti-parallel
Strand 5	J	47	51	anti-parallel
Strand 6	J	58	59	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10EX

Analysis of interatomic Contacts of Structural Units in PDB entry:
10EX