Analysis of interatomic Contacts of Structural Units in PDB entry:
10FA

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10FA entry

There are 4 chains in PDB entry 10FA (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PHE -2	LEU 372
B	PHE -2	LEU 372
C	PHE -2	LEU 372
D	PHE -2	LEU 372

There are 65 helices in PDB entry 10FA. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	42	47	Right-handed alpha
Helix 2	AA2	A	59	64	Right-handed alpha
Helix 3	AA3	A	66	73	Right-handed alpha
Helix 4	AA4	A	75	80	Right-handed alpha
Helix 5	AA5	A	91	97	Right-handed alpha
Helix 6	AA6	A	123	134	Right-handed alpha
Helix 7	AA7	A	151	177	Right-handed alpha
Helix 8	AA8	A	191	206	Right-handed alpha
Helix 9	AA9	A	220	232	Right-handed alpha
Helix 10	AB1	A	248	258	Right-handed alpha
Helix 11	AB2	A	266	273	Right-handed alpha
Helix 12	AB3	A	288	292	Right-handed 310
Helix 13	AB4	A	304	310	Right-handed alpha
Helix 14	AB5	A	311	322	Right-handed alpha
Helix 15	AB6	A	323	351	Right-handed alpha
Helix 16	AB7	A	353	365	Right-handed alpha
Helix 17	AB8	B	42	47	Right-handed alpha
Helix 18	AB9	B	59	64	Right-handed alpha
Helix 19	AC1	B	66	73	Right-handed alpha
Helix 20	AC2	B	75	80	Right-handed alpha
Helix 21	AC3	B	91	96	Right-handed alpha
Helix 22	AC4	B	123	134	Right-handed alpha
Helix 23	AC5	B	151	176	Right-handed alpha
Helix 24	AC6	B	191	206	Right-handed alpha
Helix 25	AC7	B	220	232	Right-handed alpha
Helix 26	AC8	B	248	257	Right-handed alpha
Helix 27	AC9	B	266	273	Right-handed alpha
Helix 28	AD1	B	288	292	Right-handed 310
Helix 29	AD2	B	305	310	Right-handed alpha
Helix 30	AD3	B	311	321	Right-handed alpha
Helix 31	AD4	B	324	327	Right-handed 310
Helix 32	AD5	B	328	352	Right-handed alpha
Helix 33	AD6	B	353	365	Right-handed alpha
Helix 34	AD7	C	42	47	Right-handed alpha
Helix 35	AD8	C	59	64	Right-handed alpha
Helix 36	AD9	C	66	73	Right-handed alpha
Helix 37	AE1	C	75	80	Right-handed alpha
Helix 38	AE2	C	91	97	Right-handed alpha
Helix 39	AE3	C	123	134	Right-handed alpha
Helix 40	AE4	C	151	177	Right-handed alpha
Helix 41	AE5	C	191	206	Right-handed alpha
Helix 42	AE6	C	220	232	Right-handed alpha
Helix 43	AE7	C	248	258	Right-handed alpha
Helix 44	AE8	C	266	273	Right-handed alpha
Helix 45	AE9	C	288	292	Right-handed 310
Helix 46	AF1	C	304	310	Right-handed alpha
Helix 47	AF2	C	311	322	Right-handed alpha
Helix 48	AF3	C	323	351	Right-handed alpha
Helix 49	AF4	C	353	365	Right-handed alpha
Helix 50	AF5	D	42	47	Right-handed alpha
Helix 51	AF6	D	59	64	Right-handed alpha
Helix 52	AF7	D	66	73	Right-handed alpha
Helix 53	AF8	D	75	80	Right-handed alpha
Helix 54	AF9	D	91	96	Right-handed alpha
Helix 55	AG1	D	123	134	Right-handed alpha
Helix 56	AG2	D	151	176	Right-handed alpha
Helix 57	AG3	D	191	206	Right-handed alpha
Helix 58	AG4	D	220	232	Right-handed alpha
Helix 59	AG5	D	248	257	Right-handed alpha
Helix 60	AG6	D	266	273	Right-handed alpha
Helix 61	AG7	D	288	292	Right-handed 310
Helix 62	AG8	D	305	310	Right-handed alpha
Helix 63	AG9	D	311	321	Right-handed alpha
Helix 64	AH1	D	328	352	Right-handed alpha
Helix 65	AH2	D	353	365	Right-handed alpha

There are 20 sheets in PDB entry 10FA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	9	first strand
Strand 2	A	12	19	anti-parallel
Strand 3	A	22	26	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	30	first strand
Strand 2	A	262	264	parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	54	57	parallel
Strand 3	A	86	89	parallel
Strand 4	A	138	140	parallel
Strand 5	A	181	186	parallel
Strand 6	A	209	212	parallel
Strand 7	A	241	243	parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	103	104	first strand
Strand 2	A	109	112	anti-parallel
Strand 3	A	119	122	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	276	279	first strand
Strand 2	A	282	285	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	9	first strand
Strand 2	B	12	18	anti-parallel
Strand 3	B	23	26	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	30	first strand
Strand 2	B	262	264	parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	54	57	parallel
Strand 3	B	86	89	parallel
Strand 4	B	138	140	parallel
Strand 5	B	181	185	parallel
Strand 6	B	209	211	parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	102	104	first strand
Strand 2	B	109	112	anti-parallel
Strand 3	B	119	122	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	278	279	first strand
Strand 2	B	282	283	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2	9	first strand
Strand 2	C	12	19	anti-parallel
Strand 3	C	22	26	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	262	264	parallel

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There are 7 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	54	57	parallel
Strand 3	C	86	89	parallel
Strand 4	C	138	140	parallel
Strand 5	C	181	186	parallel
Strand 6	C	209	212	parallel
Strand 7	C	241	243	parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	103	104	first strand
Strand 2	C	109	112	anti-parallel
Strand 3	C	119	122	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	276	279	first strand
Strand 2	C	282	285	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2	9	first strand
Strand 2	D	12	18	anti-parallel
Strand 3	D	23	26	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	30	first strand
Strand 2	D	262	264	parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	33	first strand
Strand 2	D	54	57	parallel
Strand 3	D	86	89	parallel
Strand 4	D	138	140	parallel
Strand 5	D	181	185	parallel
Strand 6	D	209	211	parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	102	104	first strand
Strand 2	D	109	112	anti-parallel
Strand 3	D	119	122	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	278	279	first strand
Strand 2	D	282	283	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10FA

Analysis of interatomic Contacts of Structural Units in PDB entry:
10FA