Analysis of interatomic Contacts of Structural Units in PDB entry:
10FD

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10FD entry

There are 8 chains in PDB entry 10FD (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 25	ALA 841
B	PRO 32	GLN 845
C	LYS 25	ALA 841
D	PRO 32	GLN 845
E	ASP 1	LYS 113
F	GLN 1	SER 118
I	ASP 1	LYS 113
J	GLN 1	SER 118

There are 97 helices in PDB entry 10FD. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	35	53	Right-handed alpha
Helix 2	AA2	A	70	82	Right-handed alpha
Helix 3	AA3	A	83	85	Right-handed 310
Helix 4	AA4	A	104	111	Right-handed alpha
Helix 5	AA5	A	126	130	Right-handed 310
Helix 6	AA6	A	143	148	Right-handed 310
Helix 7	AA7	A	149	158	Right-handed alpha
Helix 8	AA8	A	172	187	Right-handed alpha
Helix 9	AA9	A	227	235	Right-handed alpha
Helix 10	AB1	A	251	255	Right-handed 310
Helix 11	AB2	A	276	298	Right-handed alpha
Helix 12	AB3	A	317	327	Right-handed alpha
Helix 13	AB4	A	457	471	Right-handed alpha
Helix 14	AB5	A	559	581	Right-handed alpha
Helix 15	AB6	A	603	615	Right-handed alpha
Helix 16	AB7	A	626	657	Right-handed alpha
Helix 17	AB8	A	687	695	Right-handed alpha
Helix 18	AB9	A	696	698	Right-handed 310
Helix 19	AC1	A	699	707	Right-handed alpha
Helix 20	AC2	A	717	723	Right-handed alpha
Helix 21	AC3	A	733	743	Right-handed alpha
Helix 22	AC4	A	810	812	Right-handed 310
Helix 23	AC5	A	813	841	Right-handed alpha
Helix 24	AC6	B	77	92	Right-handed alpha
Helix 25	AC7	B	107	120	Right-handed alpha
Helix 26	AC8	B	128	132	Right-handed 310
Helix 27	AC9	B	155	162	Right-handed alpha
Helix 28	AD1	B	178	192	Right-handed alpha
Helix 29	AD2	B	214	220	Right-handed alpha
Helix 30	AD3	B	237	248	Right-handed alpha
Helix 31	AD4	B	259	264	Right-handed alpha
Helix 32	AD5	B	288	295	Right-handed alpha
Helix 33	AD6	B	296	301	Right-handed alpha
Helix 34	AD7	B	330	340	Right-handed alpha
Helix 35	AD8	B	459	469	Right-handed alpha
Helix 36	AD9	B	497	503	Right-handed alpha
Helix 37	AE1	B	556	579	Right-handed alpha
Helix 38	AE2	B	601	614	Right-handed alpha
Helix 39	AE3	B	625	656	Right-handed alpha
Helix 40	AE4	B	668	673	Right-handed alpha
Helix 41	AE5	B	689	699	Right-handed alpha
Helix 42	AE6	B	713	719	Right-handed alpha
Helix 43	AE7	B	772	785	Right-handed alpha
Helix 44	AE8	B	787	797	Right-handed alpha
Helix 45	AE9	B	819	843	Right-handed alpha
Helix 46	AF1	C	35	53	Right-handed alpha
Helix 47	AF2	C	70	81	Right-handed alpha
Helix 48	AF3	C	82	85	Right-handed 310
Helix 49	AF4	C	104	114	Right-handed alpha
Helix 50	AF5	C	125	130	Right-handed 310
Helix 51	AF6	C	143	146	Right-handed 310
Helix 52	AF7	C	147	157	Right-handed alpha
Helix 53	AF8	C	170	184	Right-handed alpha
Helix 54	AF9	C	205	211	Right-handed alpha
Helix 55	AG1	C	226	238	Right-handed alpha
Helix 56	AG2	C	255	259	Right-handed 310
Helix 57	AG3	C	276	298	Right-handed alpha
Helix 58	AG4	C	316	328	Right-handed alpha
Helix 59	AG5	C	457	471	Right-handed alpha
Helix 60	AG6	C	559	584	Right-handed alpha
Helix 61	AG7	C	604	614	Right-handed alpha
Helix 62	AG8	C	627	658	Right-handed alpha
Helix 63	AG9	C	669	674	Right-handed alpha
Helix 64	AH1	C	687	694	Right-handed alpha
Helix 65	AH2	C	696	698	Right-handed 310
Helix 66	AH3	C	699	707	Right-handed alpha
Helix 67	AH4	C	716	721	Right-handed alpha
Helix 68	AH5	C	770	781	Right-handed alpha
Helix 69	AH6	C	813	841	Right-handed alpha
Helix 70	AH7	D	53	57	Right-handed 310
Helix 71	AH8	D	77	92	Right-handed alpha
Helix 72	AH9	D	107	120	Right-handed alpha
Helix 73	AI1	D	127	132	Right-handed 310
Helix 74	AI2	D	158	165	Right-handed alpha
Helix 75	AI3	D	179	191	Right-handed alpha
Helix 76	AI4	D	216	221	Right-handed alpha
Helix 77	AI5	D	233	245	Right-handed alpha
Helix 78	AI6	D	259	264	Right-handed alpha
Helix 79	AI7	D	288	312	Right-handed alpha
Helix 80	AI8	D	329	333	Right-handed 310
Helix 81	AI9	D	334	339	Right-handed alpha
Helix 82	AJ1	D	461	473	Right-handed alpha
Helix 83	AJ2	D	518	522	Right-handed 310
Helix 84	AJ3	D	555	577	Right-handed alpha
Helix 85	AJ4	D	601	614	Right-handed alpha
Helix 86	AJ5	D	625	656	Right-handed alpha
Helix 87	AJ6	D	668	673	Right-handed alpha
Helix 88	AJ7	D	674	677	Right-handed 310
Helix 89	AJ8	D	690	698	Right-handed alpha
Helix 90	AJ9	D	700	706	Right-handed alpha
Helix 91	AK1	D	713	723	Right-handed alpha
Helix 92	AK2	D	772	786	Right-handed alpha
Helix 93	AK3	D	791	796	Right-handed alpha
Helix 94	AK4	D	814	819	Right-handed alpha
Helix 95	AK5	D	820	832	Right-handed alpha
Helix 96	AK6	D	833	845	Right-handed alpha
Helix 97	AK7	F	87	91	Right-handed 310

There are 46 sheets in PDB entry 10FD. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	64	first strand
Strand 2	A	26	32	parallel
Strand 3	A	87	92	parallel
Strand 4	A	118	120	parallel
Strand 5	A	138	139	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	193	197	first strand
Strand 2	A	164	168	parallel
Strand 3	A	218	222	parallel
Strand 4	A	246	248	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	267	268	first strand
Strand 2	A	354	356	anti-parallel
Strand 3	A	361	363	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	365	367	first strand
Strand 2	A	372	374	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	478	first strand
Strand 2	A	397	402	parallel
Strand 3	A	512	518	parallel
Strand 4	A	758	763	anti-parallel
Strand 5	A	527	529	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	410	413	first strand
Strand 2	A	451	456	anti-parallel
Strand 3	A	434	438	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	487	489	first strand
Strand 2	A	496	498	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	729	732	first strand
Strand 2	A	538	543	anti-parallel
Strand 3	A	746	753	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	73	first strand
Strand 2	B	34	42	parallel
Strand 3	B	97	101	parallel
Strand 4	B	123	127	parallel
Strand 5	B	143	145	parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	171	173	first strand
Strand 2	B	227	231	parallel
Strand 3	B	255	258	parallel
Strand 4	B	278	282	parallel
Strand 5	B	362	367	anti-parallel
Strand 6	B	373	375	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	377	379	first strand
Strand 2	B	384	386	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	405	410	first strand
Strand 2	B	475	480	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	418	420	first strand
Strand 2	B	456	458	anti-parallel
Strand 3	B	434	435	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	508	509	first strand
Strand 2	B	765	766	anti-parallel
Strand 3	B	524	525	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	530	532	first strand
Strand 2	B	760	762	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	683	684	first strand
Strand 2	B	728	732	parallel
Strand 3	B	534	539	anti-parallel
Strand 4	B	748	750	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	59	66	first strand
Strand 2	C	26	33	parallel
Strand 3	C	87	92	parallel
Strand 4	C	118	120	parallel
Strand 5	C	137	139	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	193	197	first strand
Strand 2	C	163	168	parallel
Strand 3	C	218	221	parallel
Strand 4	C	246	248	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	270	271	first strand
Strand 2	C	351	356	anti-parallel
Strand 3	C	361	367	anti-parallel
Strand 4	C	372	373	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	478	first strand
Strand 2	C	397	402	parallel
Strand 3	C	512	518	parallel
Strand 4	C	758	763	anti-parallel
Strand 5	C	527	529	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	410	413	first strand
Strand 2	C	451	456	anti-parallel
Strand 3	C	434	438	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	486	489	first strand
Strand 2	C	496	499	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	682	first strand
Strand 2	C	728	732	parallel
Strand 3	C	538	543	anti-parallel
Strand 4	C	746	753	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	68	73	first strand
Strand 2	D	37	42	parallel
Strand 3	D	97	100	parallel
Strand 4	D	123	125	parallel
Strand 5	D	143	145	parallel

Back to list of sheets
Back to top of page

There are 8 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	208	209	first strand
Strand 2	D	170	172	parallel
Strand 3	D	227	229	parallel
Strand 4	D	255	258	parallel
Strand 5	D	278	282	parallel
Strand 6	D	362	367	anti-parallel
Strand 7	D	373	380	anti-parallel
Strand 8	D	383	384	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	342	344	first strand
Strand 2	D	347	349	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	475	478	first strand
Strand 2	D	405	409	parallel
Strand 3	D	508	509	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	418	420	first strand
Strand 2	D	455	458	anti-parallel
Strand 3	D	434	436	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	489	490	first strand
Strand 2	D	493	494	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	524	525	first strand
Strand 2	D	765	766	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	683	684	first strand
Strand 2	D	728	732	parallel
Strand 3	D	531	537	anti-parallel
Strand 4	D	757	761	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	6	7	first strand
Strand 2	E	22	24	anti-parallel
Strand 3	E	76	77	anti-parallel
Strand 4	E	72	73	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	10	13	first strand
Strand 2	E	109	112	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	30	31	first strand
Strand 2	E	36	37	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	51	54	first strand
Strand 2	E	40	44	anti-parallel
Strand 3	E	91	95	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	68	69	first strand
Strand 2	E	80	81	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	17	23	first strand
Strand 2	F	78	84	anti-parallel
Strand 3	F	68	73	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	44	47	first strand
Strand 2	F	34	40	anti-parallel
Strand 3	F	93	99	anti-parallel
Strand 4	F	106	109	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	4	5	first strand
Strand 2	I	24	25	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	11	13	first strand
Strand 2	I	110	112	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	19	22	first strand
Strand 2	I	78	81	anti-parallel
Strand 3	I	68	71	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	50	55	anti-parallel
Strand 3	I	39	44	anti-parallel
Strand 4	I	91	96	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	3	5	first strand
Strand 2	J	23	25	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	18	19	first strand
Strand 2	J	78	83	anti-parallel
Strand 3	J	69	73	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	58	60	first strand
Strand 2	J	45	51	anti-parallel
Strand 3	J	34	39	anti-parallel
Strand 4	J	93	99	anti-parallel
Strand 5	J	106	109	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	58	60	first strand
Strand 2	J	45	51	anti-parallel
Strand 3	J	34	39	anti-parallel
Strand 4	J	93	99	anti-parallel
Strand 5	J	113	114	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10FD

Analysis of interatomic Contacts of Structural Units in PDB entry:
10FD