Analysis of interatomic Contacts of Structural Units in PDB entry:
10IE

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10IE entry

There are 4 chains in PDB entry 10IE (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	HIS 33	PRO 797
B	ALA 23	LEU 166
H	ASP 19	ASP 237
L	ASP 23	GLU 235

There are 36 helices in PDB entry 10IE. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	63	67	Right-handed 310
Helix 2	AA2	A	78	82	Right-handed 310
Helix 3	AA3	A	111	116	Right-handed alpha
Helix 4	AA4	A	150	156	Right-handed alpha
Helix 5	AA5	A	210	215	Right-handed alpha
Helix 6	AA6	A	224	228	Right-handed alpha
Helix 7	AA7	A	333	345	Right-handed alpha
Helix 8	AA8	A	346	348	Right-handed 310
Helix 9	AA9	A	351	366	Right-handed alpha
Helix 10	AB1	A	375	401	Right-handed alpha
Helix 11	AB2	A	405	426	Right-handed alpha
Helix 12	AB3	A	442	464	Right-handed alpha
Helix 13	AB4	A	466	481	Right-handed alpha
Helix 14	AB5	A	482	506	Right-handed alpha
Helix 15	AB6	A	512	533	Right-handed alpha
Helix 16	AB7	A	536	554	Right-handed alpha
Helix 17	AB8	A	555	573	Right-handed alpha
Helix 18	AB9	A	582	586	Right-handed 310
Helix 19	AC1	A	587	592	Right-handed 310
Helix 20	AC2	A	594	599	Right-handed alpha
Helix 21	AC3	A	614	622	Right-handed alpha
Helix 22	AC4	A	634	645	Right-handed alpha
Helix 23	AC5	A	646	649	Right-handed 310
Helix 24	AC6	A	721	725	Right-handed 310
Helix 25	AC7	A	751	760	Right-handed alpha
Helix 26	AC8	A	791	794	Right-handed 310
Helix 27	AC9	B	35	42	Right-handed alpha
Helix 28	AD1	B	95	109	Right-handed alpha
Helix 29	AD2	B	116	136	Right-handed alpha
Helix 30	AD3	H	80	83	Right-handed 310
Helix 31	AD4	H	92	94	Right-handed 310
Helix 32	AD5	H	105	109	Right-handed 310
Helix 33	AD6	H	155	158	Right-handed 310
Helix 34	AD7	L	101	105	Right-handed 310
Helix 35	AD8	L	143	150	Right-handed alpha
Helix 36	AD9	L	204	210	Right-handed alpha

There are 17 sheets in PDB entry 10IE. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	105	110	first strand
Strand 2	A	89	95	anti-parallel
Strand 3	B	69	73	parallel
Strand 4	B	80	85	anti-parallel
Strand 5	B	90	93	anti-parallel
Strand 6	B	31	32	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	140	141	first strand
Strand 2	A	246	257	anti-parallel
Strand 3	A	261	268	anti-parallel
Strand 4	A	271	278	anti-parallel
Strand 5	A	284	290	anti-parallel
Strand 6	A	319	324	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	232	236	first strand
Strand 2	A	246	257	anti-parallel
Strand 3	A	435	438	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	204	first strand
Strand 2	A	221	223	parallel
Strand 3	A	402	404	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	626	627	first strand
Strand 2	A	651	652	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	663	665	first strand
Strand 2	A	672	676	anti-parallel
Strand 3	A	698	702	anti-parallel
Strand 4	A	684	687	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	714	715	first strand
Strand 2	A	787	789	parallel
Strand 3	A	777	781	anti-parallel
Strand 4	A	733	737	anti-parallel
Strand 5	A	743	748	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	25	28	first strand
Strand 2	B	53	56	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	24	25	first strand
Strand 2	H	35	41	anti-parallel
Strand 3	H	96	102	anti-parallel
Strand 4	H	87	91	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	76	78	first strand
Strand 2	H	64	71	anti-parallel
Strand 3	H	52	58	anti-parallel
Strand 4	H	110	116	anti-parallel
Strand 5	H	131	133	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	144	147	first strand
Strand 2	H	159	168	anti-parallel
Strand 3	H	197	206	anti-parallel
Strand 4	H	187	188	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	144	147	first strand
Strand 2	H	159	168	anti-parallel
Strand 3	H	197	206	anti-parallel
Strand 4	H	192	194	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	174	176	first strand
Strand 2	H	216	221	anti-parallel
Strand 3	H	230	233	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	27	28	first strand
Strand 2	L	41	46	anti-parallel
Strand 3	L	92	97	anti-parallel
Strand 4	L	84	86	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	32	35	first strand
Strand 2	L	124	128	parallel
Strand 3	L	107	112	anti-parallel
Strand 4	L	55	60	anti-parallel
Strand 5	L	67	71	anti-parallel
Strand 6	L	75	76	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	138	140	first strand
Strand 2	L	152	161	anti-parallel
Strand 3	L	195	203	anti-parallel
Strand 4	L	181	186	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	167	169	first strand
Strand 2	L	213	219	anti-parallel
Strand 3	L	229	232	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10IE

Analysis of interatomic Contacts of Structural Units in PDB entry:
10IE