Analysis of interatomic Contacts of Structural Units in PDB entry:
10KF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10KF entry

There are 7 chains in PDB entry 10KF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 27GLY 763
B
 ALA 2GLY 734
F
 LEU 66SER 143
I
 PHE 5SER 36
J
 MET 4LEU 44
K
 ASN 2LEU 80
M
 MET 1ARG 29
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 75 helices in PDB entry 10KF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 52Right-handed alpha
Helix 2
AA2
A
65 96Right-handed alpha
Helix 3
AA3
A
99 106Right-handed alpha
Helix 4
AA4
A
122 127Right-handed 310
Helix 5
AA5
A
142 151Right-handed alpha
Helix 6
AA6
A
154 182Right-handed alpha
Helix 7
AA7
A
186 191Right-handed alpha
Helix 8
AA8
A
192 203Right-handed alpha
Helix 9
AA9
A
203 219Right-handed alpha
Helix 10
AB1
A
219 232Right-handed alpha
Helix 11
AB2
A
257 262Right-handed alpha
Helix 12
AB3
A
265 271Right-handed 310
Helix 13
AB4
A
272 277Right-handed alpha
Helix 14
AB5
A
280 284Right-handed 310
Helix 15
AB6
A
301 320Right-handed alpha
Helix 16
AB7
A
332 340Right-handed alpha
Helix 17
AB8
A
351 357Right-handed alpha
Helix 18
AB9
A
359 383Right-handed alpha
Helix 19
AC1
A
394 424Right-handed alpha
Helix 20
AC2
A
436 442Right-handed alpha
Helix 21
AC3
A
444 477Right-handed alpha
Helix 22
AC4
A
492 505Right-handed alpha
Helix 23
AC5
A
540 567Right-handed alpha
Helix 24
AC6
A
576 581Right-handed alpha
Helix 25
AC7
A
598 628Right-handed alpha
Helix 26
AC8
A
653 660Right-handed alpha
Helix 27
AC9
A
662 667Right-handed alpha
Helix 28
AD1
A
668 670Right-handed 310
Helix 29
AD2
A
675 678Right-handed 310
Helix 30
AD3
A
679 698Right-handed alpha
Helix 31
AD4
A
701 719Right-handed alpha
Helix 32
AD5
A
731 760Right-handed alpha
Helix 33
AD6
B
19 27Right-handed alpha
Helix 34
AD7
B
39 72Right-handed alpha
Helix 35
AD8
B
73 78Right-handed alpha
Helix 36
AD9
B
97 105Right-handed alpha
Helix 37
AE1
B
119 128Right-handed alpha
Helix 38
AE2
B
131 156Right-handed alpha
Helix 39
AE3
B
164 169Right-handed alpha
Helix 40
AE4
B
171 181Right-handed alpha
Helix 41
AE5
B
183 197Right-handed alpha
Helix 42
AE6
B
197 203Right-handed alpha
Helix 43
AE7
B
222 227Right-handed alpha
Helix 44
AE8
B
229 234Right-handed 310
Helix 45
AE9
B
269 288Right-handed alpha
Helix 46
AF1
B
300 308Right-handed alpha
Helix 47
AF2
B
321 328Right-handed alpha
Helix 48
AF3
B
329 353Right-handed alpha
Helix 49
AF4
B
364 397Right-handed alpha
Helix 50
AF5
B
406 414Right-handed alpha
Helix 51
AF6
B
414 446Right-handed alpha
Helix 52
AF7
B
457 468Right-handed alpha
Helix 53
AF8
B
483 490Right-handed alpha
Helix 54
AF9
B
493 502Right-handed alpha
Helix 55
AG1
B
513 540Right-handed alpha
Helix 56
AG2
B
550 554Right-handed 310
Helix 57
AG3
B
571 604Right-handed alpha
Helix 58
AG4
B
605 612Right-handed alpha
Helix 59
AG5
B
615 622Right-handed alpha
Helix 60
AG6
B
625 627Right-handed 310
Helix 61
AG7
B
628 633Right-handed alpha
Helix 62
AG8
B
643 666Right-handed alpha
Helix 63
AG9
B
668 684Right-handed alpha
Helix 64
AH1
B
701 731Right-handed alpha
Helix 65
AH2
F
76 80Right-handed 310
Helix 66
AH3
F
81 103Right-handed alpha
Helix 67
AH4
F
113 118Right-handed alpha
Helix 68
AH5
F
120 130Right-handed alpha
Helix 69
AH6
F
133 142Right-handed alpha
Helix 70
AH7
I
8 36Right-handed alpha
Helix 71
AH8
J
5 12Right-handed alpha
Helix 72
AH9
J
13 36Right-handed alpha
Helix 73
AI1
K
9 30Right-handed alpha
Helix 74
AI2
K
52 77Right-handed alpha
Helix 75
AI3
M
2 27Right-handed alpha
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There are 3 sheets in PDB entry 10KF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
526 528first strand
Strand 2
A
531 534anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
632 633first strand
Strand 2
A
639 640anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
635 636first strand
Strand 2
B
639 640anti-parallel
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