Analysis of interatomic Contacts of Structural Units in PDB entry:
10ME

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10ME entry

There are 8 chains in PDB entry 10ME (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	G 1	A 31
B	T 2	C 32
G	PHE 8	PHE 231
H	VAL 5	LEU 234
I	VAL 2	ASP 1341
J	GLU 16	ARG 1373
K	ALA 2	LEU 80
R	G 10	U 19

There are113 helices in PDB entry 10ME. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	G	34	48	Right-handed alpha
Helix 2	AA2	G	77	87	Right-handed alpha
Helix 3	AA3	G	113	115	Right-handed 310
Helix 4	AA4	G	154	159	Right-handed alpha
Helix 5	AA5	G	212	229	Right-handed alpha
Helix 6	AA6	H	34	50	Right-handed alpha
Helix 7	AA7	H	77	88	Right-handed alpha
Helix 8	AA8	H	113	115	Right-handed 310
Helix 9	AA9	H	154	158	Right-handed 310
Helix 10	AB1	H	212	229	Right-handed alpha
Helix 11	AB2	H	230	232	Right-handed 310
Helix 12	AB3	I	28	40	Right-handed alpha
Helix 13	AB4	I	47	57	Right-handed alpha
Helix 14	AB5	I	81	89	Right-handed alpha
Helix 15	AB6	I	163	167	Right-handed 310
Helix 16	AB7	I	206	213	Right-handed alpha
Helix 17	AB8	I	216	225	Right-handed alpha
Helix 18	AB9	I	242	247	Right-handed 310
Helix 19	AC1	I	270	280	Right-handed alpha
Helix 20	AC2	I	289	293	Right-handed 310
Helix 21	AC3	I	318	328	Right-handed alpha
Helix 22	AC4	I	345	353	Right-handed alpha
Helix 23	AC5	I	358	371	Right-handed alpha
Helix 24	AC6	I	377	391	Right-handed alpha
Helix 25	AC7	I	398	410	Right-handed alpha
Helix 26	AC8	I	421	437	Right-handed alpha
Helix 27	AC9	I	455	482	Right-handed alpha
Helix 28	AD1	I	495	509	Right-handed alpha
Helix 29	AD2	I	519	527	Right-handed alpha
Helix 30	AD3	I	539	543	Right-handed 310
Helix 31	AD4	I	607	612	Right-handed alpha
Helix 32	AD5	I	662	667	Right-handed alpha
Helix 33	AD6	I	670	674	Right-handed 310
Helix 34	AD7	I	675	686	Right-handed alpha
Helix 35	AD8	I	703	712	Right-handed alpha
Helix 36	AD9	I	820	826	Right-handed alpha
Helix 37	AE1	I	858	863	Right-handed alpha
Helix 38	AE2	I	942	983	Right-handed alpha
Helix 39	AE3	I	984	992	Right-handed alpha
Helix 40	AE4	I	1006	1038	Right-handed alpha
Helix 41	AE5	I	1081	1085	Right-handed 310
Helix 42	AE6	I	1101	1106	Right-handed alpha
Helix 43	AE7	I	1109	1134	Right-handed alpha
Helix 44	AE8	I	1137	1151	Right-handed alpha
Helix 45	AE9	I	1165	1177	Right-handed alpha
Helix 46	AF1	I	1191	1202	Right-handed alpha
Helix 47	AF2	I	1238	1242	Right-handed 310
Helix 48	AF3	I	1271	1282	Right-handed alpha
Helix 49	AF4	I	1284	1293	Right-handed alpha
Helix 50	AF5	I	1297	1311	Right-handed alpha
Helix 51	AF6	I	1320	1334	Right-handed alpha
Helix 52	AF7	J	26	34	Right-handed alpha
Helix 53	AF8	J	58	63	Right-handed alpha
Helix 54	AF9	J	77	81	Right-handed 310
Helix 55	AG1	J	94	100	Right-handed 310
Helix 56	AG2	J	114	119	Right-handed alpha
Helix 57	AG3	J	122	129	Right-handed alpha
Helix 58	AG4	J	131	140	Right-handed alpha
Helix 59	AG5	J	161	167	Right-handed alpha
Helix 60	AG6	J	168	173	Right-handed alpha
Helix 61	AG7	J	174	176	Right-handed 310
Helix 62	AG8	J	181	191	Right-handed alpha
Helix 63	AG9	J	194	208	Right-handed alpha
Helix 64	AH1	J	210	230	Right-handed alpha
Helix 65	AH2	J	233	236	Right-handed 310
Helix 66	AH3	J	246	250	Right-handed 310
Helix 67	AH4	J	263	285	Right-handed alpha
Helix 68	AH5	J	288	308	Right-handed alpha
Helix 69	AH6	J	318	322	Right-handed 310
Helix 70	AH7	J	336	342	Right-handed alpha
Helix 71	AH8	J	370	377	Right-handed alpha
Helix 72	AH9	J	377	389	Right-handed alpha
Helix 73	AI1	J	393	404	Right-handed alpha
Helix 74	AI2	J	405	416	Right-handed alpha
Helix 75	AI3	J	417	419	Right-handed 310
Helix 76	AI4	J	430	432	Right-handed 310
Helix 77	AI5	J	450	452	Right-handed 310
Helix 78	AI6	J	453	458	Right-handed alpha
Helix 79	AI7	J	473	483	Right-handed alpha
Helix 80	AI8	J	485	489	Right-handed 310
Helix 81	AI9	J	504	514	Right-handed alpha
Helix 82	AJ1	J	529	540	Right-handed alpha
Helix 83	AJ2	J	574	581	Right-handed alpha
Helix 84	AJ3	J	597	612	Right-handed alpha
Helix 85	AJ4	J	614	636	Right-handed alpha
Helix 86	AJ5	J	640	644	Right-handed 310
Helix 87	AJ6	J	649	670	Right-handed alpha
Helix 88	AJ7	J	674	703	Right-handed alpha
Helix 89	AJ8	J	720	725	Right-handed alpha
Helix 90	AJ9	J	733	742	Right-handed alpha
Helix 91	AK1	J	768	789	Right-handed alpha
Helix 92	AK2	J	789	804	Right-handed alpha
Helix 93	AK3	J	834	840	Right-handed alpha
Helix 94	AK4	J	865	876	Right-handed alpha
Helix 95	AK5	J	884	888	Right-handed 310
Helix 96	AK6	J	896	900	Right-handed alpha
Helix 97	AK7	J	914	932	Right-handed alpha
Helix 98	AK8	J	933	937	Right-handed 310
Helix 99	AK9	J	1133	1146	Right-handed alpha
Helix 100	AL1	J	1168	1170	Right-handed 310
Helix 101	AL2	J	1216	1225	Right-handed alpha
Helix 102	AL3	J	1225	1244	Right-handed alpha
Helix 103	AL4	J	1250	1260	Right-handed alpha
Helix 104	AL5	J	1282	1294	Right-handed alpha
Helix 105	AL6	J	1308	1315	Right-handed alpha
Helix 106	AL7	J	1318	1326	Right-handed alpha
Helix 107	AL8	J	1327	1339	Right-handed alpha
Helix 108	AL9	J	1347	1354	Right-handed alpha
Helix 109	AM1	J	1362	1373	Right-handed alpha
Helix 110	AM2	K	6	13	Right-handed alpha
Helix 111	AM3	K	15	33	Right-handed alpha
Helix 112	AM4	K	45	56	Right-handed alpha
Helix 113	AM5	K	60	80	Right-handed alpha

There are 49 sheets in PDB entry 10ME. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	12	17	first strand
Strand 2	G	23	31	anti-parallel
Strand 3	G	199	207	anti-parallel
Strand 4	G	180	189	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	97	105	first strand
Strand 2	G	139	149	anti-parallel
Strand 3	G	53	61	anti-parallel
Strand 4	G	170	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	108	111	first strand
Strand 2	G	129	133	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	152	153	first strand
Strand 2	G	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	15	20	first strand
Strand 2	H	23	28	anti-parallel
Strand 3	H	198	207	anti-parallel
Strand 4	H	180	190	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	98	105	first strand
Strand 2	H	139	150	anti-parallel
Strand 3	H	52	61	anti-parallel
Strand 4	H	171	172	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	108	111	first strand
Strand 2	H	129	133	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	152	153	first strand
Strand 2	H	175	176	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	I	66	75	anti-parallel
Strand 3	I	93	106	anti-parallel
Strand 4	I	109	128	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	143	145	first strand
Strand 2	I	512	514	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	148	151	first strand
Strand 2	I	451	454	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	154	158	first strand
Strand 2	I	173	177	anti-parallel
Strand 3	I	184	188	anti-parallel
Strand 4	I	194	198	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	284	286	first strand
Strand 2	I	238	240	anti-parallel
Strand 3	I	227	231	anti-parallel
Strand 4	I	332	336	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	255	257	first strand
Strand 2	I	260	263	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	301	302	first strand
Strand 2	I	309	311	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	529	530	first strand
Strand 2	I	573	574	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	595	anti-parallel
Strand 3	I	598	606	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	580	581	first strand
Strand 2	I	587	595	anti-parallel
Strand 3	I	652	654	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	616	617	first strand
Strand 2	I	633	637	anti-parallel
Strand 3	I	642	646	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	700	701	first strand
Strand 2	I	1182	1183	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	716	717	first strand
Strand 2	I	782	785	anti-parallel
Strand 3	I	768	769	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	748	752	first strand
Strand 2	I	731	736	anti-parallel
Strand 3	I	722	727	anti-parallel
Strand 4	I	776	777	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	757	758	first strand
Strand 2	I	764	765	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	789	790	first strand
Strand 2	I	793	794	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1076	1080	first strand
Strand 2	I	816	819	parallel
Strand 3	I	1096	1098	anti-parallel
Strand 4	I	798	804	parallel
Strand 5	I	1225	1232	anti-parallel
Strand 6	I	1209	1210	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	830	832	first strand
Strand 2	I	1056	1058	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	835	841	first strand
Strand 2	I	1046	1053	anti-parallel
Strand 3	I	931	935	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	876	877	first strand
Strand 2	I	926	927	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1066	1067	first strand
Strand 2	I	1073	1074	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1244	1246	first strand
Strand 2	J	350	353	anti-parallel
Strand 3	J	466	469	anti-parallel
Strand 4	J	421	424	anti-parallel
Strand 5	J	434	442	anti-parallel
Strand 6	J	365	369	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	1335	1340	first strand
Strand 2	J	19	24	anti-parallel
Strand 3	J	1341	1342	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	103	112	first strand
Strand 2	J	238	244	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	159	160	first strand
Strand 2	J	144	146	anti-parallel
Strand 3	J	178	179	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	355	356	first strand
Strand 2	J	447	448	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	526	527	first strand
Strand 2	J	547	559	parallel
Strand 3	J	562	573	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	706	708	first strand
Strand 2	J	713	715	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	809	811	first strand
Strand 2	J	894	895	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	820	822	first strand
Strand 2	J	880	882	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	825	826	first strand
Strand 2	J	831	833	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	848	849	first strand
Strand 2	J	856	858	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	949	951	first strand
Strand 2	J	1016	1019	anti-parallel
Strand 3	J	1002	1003	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	991	997	first strand
Strand 2	J	980	985	anti-parallel
Strand 3	J	956	961	anti-parallel
Strand 4	J	1010	1011	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	965	967	first strand
Strand 2	J	973	975	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1025	1028	first strand
Strand 2	J	1120	1124	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1098	1099	first strand
Strand 2	J	1077	1081	anti-parallel
Strand 3	J	1033	1038	anti-parallel
Strand 4	J	1114	1115	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1046	1050	first strand
Strand 2	J	1057	1061	anti-parallel
Strand 3	J	1106	1107	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1155	1156	first strand
Strand 2	J	1209	1211	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1188	1191	first strand
Strand 2	J	1172	1178	anti-parallel
Strand 3	J	1161	1165	anti-parallel
Strand 4	J	1203	1204	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	1279	1281	first strand
Strand 2	J	1263	1266	anti-parallel
Strand 3	J	1302	1304	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10ME

Analysis of interatomic Contacts of Structural Units in PDB entry:
10ME