Analysis of interatomic Contacts of Structural Units in PDB entry:
10MU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10MU entry

There are 5 chains in PDB entry 10MU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	UNK 2	UNK 119
B	UNK 2	UNK 106
C	CYS 704	PRO 1143
D	VAL 705	GLN 1142
E	ALA 706	LEU 1141

There are 45 helices in PDB entry 10MU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	87	91	Right-handed 310
Helix 2	AA2	A	101	103	Right-handed 310
Helix 3	AA3	B	79	83	Right-handed 310
Helix 4	AA4	C	737	742	Right-handed alpha
Helix 5	AA5	C	748	783	Right-handed alpha
Helix 6	AA6	C	816	823	Right-handed alpha
Helix 7	AA7	C	833	842	Right-handed alpha
Helix 8	AA8	C	847	855	Right-handed alpha
Helix 9	AA9	C	866	885	Right-handed alpha
Helix 10	AB1	C	886	889	Right-handed 310
Helix 11	AB2	C	897	909	Right-handed alpha
Helix 12	AB3	C	912	918	Right-handed alpha
Helix 13	AB4	C	919	933	Right-handed alpha
Helix 14	AB5	C	934	937	Right-handed 310
Helix 15	AB6	C	945	967	Right-handed alpha
Helix 16	AB7	C	976	984	Right-handed alpha
Helix 17	AB8	C	985	1032	Right-handed alpha
Helix 18	AB9	D	737	742	Right-handed alpha
Helix 19	AC1	D	749	754	Right-handed alpha
Helix 20	AC2	D	755	758	Right-handed 310
Helix 21	AC3	D	759	783	Right-handed alpha
Helix 22	AC4	D	816	824	Right-handed alpha
Helix 23	AC5	D	833	841	Right-handed alpha
Helix 24	AC6	D	847	855	Right-handed alpha
Helix 25	AC7	D	866	884	Right-handed alpha
Helix 26	AC8	D	897	908	Right-handed alpha
Helix 27	AC9	D	912	918	Right-handed alpha
Helix 28	AD1	D	919	935	Right-handed alpha
Helix 29	AD2	D	945	966	Right-handed alpha
Helix 30	AD3	D	975	981	Right-handed alpha
Helix 31	AD4	D	993	1032	Right-handed alpha
Helix 32	AD5	E	737	743	Right-handed alpha
Helix 33	AD6	E	750	755	Right-handed alpha
Helix 34	AD7	E	758	782	Right-handed alpha
Helix 35	AD8	E	816	824	Right-handed alpha
Helix 36	AD9	E	833	841	Right-handed alpha
Helix 37	AE1	E	844	846	Right-handed 310
Helix 38	AE2	E	847	855	Right-handed alpha
Helix 39	AE3	E	866	884	Right-handed alpha
Helix 40	AE4	E	897	908	Right-handed alpha
Helix 41	AE5	E	912	918	Right-handed alpha
Helix 42	AE6	E	919	938	Right-handed alpha
Helix 43	AE7	E	945	965	Right-handed alpha
Helix 44	AE8	E	976	984	Right-handed alpha
Helix 45	AE9	E	985	1032	Right-handed alpha

There are 19 sheets in PDB entry 10MU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	5	7	first strand
Strand 2	A	18	23	anti-parallel
Strand 3	A	78	83	anti-parallel
Strand 4	A	68	73	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	45	51	anti-parallel
Strand 3	A	34	39	anti-parallel
Strand 4	A	92	99	anti-parallel
Strand 5	A	108	109	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	60	first strand
Strand 2	A	45	51	anti-parallel
Strand 3	A	34	39	anti-parallel
Strand 4	A	92	99	anti-parallel
Strand 5	A	115	117	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	7	first strand
Strand 2	B	22	25	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	85	90	anti-parallel
Strand 4	B	96	97	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	45	46	first strand
Strand 2	B	33	38	anti-parallel
Strand 3	B	85	90	anti-parallel
Strand 4	B	101	102	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	64	first strand
Strand 2	B	73	75	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	711	728	first strand
Strand 2	C	1059	1076	anti-parallel
Strand 3	C	1047	1056	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	733	736	first strand
Strand 2	C	858	861	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1120	1125	first strand
Strand 2	C	1086	1090	anti-parallel
Strand 3	C	1080	1083	anti-parallel
Strand 4	C	1132	1134	parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1094	1097	first strand
Strand 2	C	1102	1105	anti-parallel
Strand 3	C	1113	1114	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	711	728	first strand
Strand 2	D	1059	1076	anti-parallel
Strand 3	D	1047	1056	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	733	736	first strand
Strand 2	D	858	861	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1120	1125	first strand
Strand 2	D	1086	1090	anti-parallel
Strand 3	D	1081	1083	anti-parallel
Strand 4	D	1133	1134	parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1094	1097	first strand
Strand 2	D	1102	1105	anti-parallel
Strand 3	D	1113	1114	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	728	first strand
Strand 2	E	1059	1077	anti-parallel
Strand 3	E	1047	1056	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	711	728	first strand
Strand 2	E	1059	1077	anti-parallel
Strand 3	E	1094	1097	anti-parallel
Strand 4	E	1102	1105	anti-parallel
Strand 5	E	1113	1114	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	734	736	first strand
Strand 2	E	858	860	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1120	1122	first strand
Strand 2	E	1086	1090	anti-parallel
Strand 3	E	1080	1083	anti-parallel
Strand 4	E	1132	1134	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10MU

Analysis of interatomic Contacts of Structural Units in PDB entry:
10MU