Analysis of interatomic Contacts of Structural Units in PDB entry:
10MZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10MZ entry

There are 6 chains in PDB entry 10MZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 0	LYS 350
B	GLY 1	LYS 350
C	GLY 1	LYS 350
D	GLY 0	LYS 350
E	GLY 1	LYS 350
F	GLY 1	LYS 350

There are 91 helices in PDB entry 10MZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	13	Right-handed alpha
Helix 2	AA2	A	42	52	Right-handed alpha
Helix 3	AA3	A	55	66	Right-handed alpha
Helix 4	AA4	A	111	119	Right-handed alpha
Helix 5	AA5	A	137	149	Right-handed alpha
Helix 6	AA6	A	182	189	Right-handed alpha
Helix 7	AA7	A	190	193	Right-handed 310
Helix 8	AA8	A	207	219	Right-handed alpha
Helix 9	AA9	A	230	242	Right-handed alpha
Helix 10	AB1	A	243	256	Right-handed alpha
Helix 11	AB2	A	285	295	Right-handed alpha
Helix 12	AB3	A	297	307	Right-handed alpha
Helix 13	AB4	A	314	326	Right-handed alpha
Helix 14	AB5	A	329	337	Right-handed alpha
Helix 15	AB6	A	339	350	Right-handed alpha
Helix 16	AB7	B	2	13	Right-handed alpha
Helix 17	AB8	B	42	52	Right-handed alpha
Helix 18	AB9	B	55	66	Right-handed alpha
Helix 19	AC1	B	103	107	Right-handed 310
Helix 20	AC2	B	111	119	Right-handed alpha
Helix 21	AC3	B	134	148	Right-handed alpha
Helix 22	AC4	B	182	193	Right-handed alpha
Helix 23	AC5	B	205	219	Right-handed alpha
Helix 24	AC6	B	232	242	Right-handed alpha
Helix 25	AC7	B	243	257	Right-handed alpha
Helix 26	AC8	B	285	292	Right-handed alpha
Helix 27	AC9	B	297	311	Right-handed alpha
Helix 28	AD1	B	314	324	Right-handed alpha
Helix 29	AD2	B	327	337	Right-handed alpha
Helix 30	AD3	B	340	350	Right-handed alpha
Helix 31	AD4	C	2	13	Right-handed alpha
Helix 32	AD5	C	42	52	Right-handed alpha
Helix 33	AD6	C	55	66	Right-handed alpha
Helix 34	AD7	C	113	119	Right-handed alpha
Helix 35	AD8	C	135	149	Right-handed alpha
Helix 36	AD9	C	182	190	Right-handed alpha
Helix 37	AE1	C	205	218	Right-handed alpha
Helix 38	AE2	C	230	242	Right-handed alpha
Helix 39	AE3	C	243	257	Right-handed alpha
Helix 40	AE4	C	285	295	Right-handed alpha
Helix 41	AE5	C	299	306	Right-handed alpha
Helix 42	AE6	C	307	311	Right-handed 310
Helix 43	AE7	C	314	325	Right-handed alpha
Helix 44	AE8	C	329	337	Right-handed alpha
Helix 45	AE9	C	339	350	Right-handed alpha
Helix 46	AF1	D	1	13	Right-handed alpha
Helix 47	AF2	D	42	52	Right-handed alpha
Helix 48	AF3	D	55	66	Right-handed alpha
Helix 49	AF4	D	111	119	Right-handed alpha
Helix 50	AF5	D	137	149	Right-handed alpha
Helix 51	AF6	D	182	190	Right-handed alpha
Helix 52	AF7	D	191	193	Right-handed 310
Helix 53	AF8	D	207	219	Right-handed alpha
Helix 54	AF9	D	230	242	Right-handed alpha
Helix 55	AG1	D	243	256	Right-handed alpha
Helix 56	AG2	D	285	295	Right-handed alpha
Helix 57	AG3	D	297	307	Right-handed alpha
Helix 58	AG4	D	314	326	Right-handed alpha
Helix 59	AG5	D	329	337	Right-handed alpha
Helix 60	AG6	D	339	350	Right-handed alpha
Helix 61	AG7	E	2	13	Right-handed alpha
Helix 62	AG8	E	42	52	Right-handed alpha
Helix 63	AG9	E	55	66	Right-handed alpha
Helix 64	AH1	E	103	107	Right-handed 310
Helix 65	AH2	E	111	119	Right-handed alpha
Helix 66	AH3	E	134	148	Right-handed alpha
Helix 67	AH4	E	182	193	Right-handed alpha
Helix 68	AH5	E	205	219	Right-handed alpha
Helix 69	AH6	E	232	242	Right-handed alpha
Helix 70	AH7	E	243	257	Right-handed alpha
Helix 71	AH8	E	285	292	Right-handed alpha
Helix 72	AH9	E	297	311	Right-handed alpha
Helix 73	AI1	E	314	324	Right-handed alpha
Helix 74	AI2	E	327	337	Right-handed alpha
Helix 75	AI3	E	340	350	Right-handed alpha
Helix 76	AI4	F	2	13	Right-handed alpha
Helix 77	AI5	F	42	52	Right-handed alpha
Helix 78	AI6	F	55	66	Right-handed alpha
Helix 79	AI7	F	103	108	Right-handed alpha
Helix 80	AI8	F	113	119	Right-handed alpha
Helix 81	AI9	F	135	149	Right-handed alpha
Helix 82	AJ1	F	182	190	Right-handed alpha
Helix 83	AJ2	F	205	218	Right-handed alpha
Helix 84	AJ3	F	230	242	Right-handed alpha
Helix 85	AJ4	F	243	257	Right-handed alpha
Helix 86	AJ5	F	285	295	Right-handed alpha
Helix 87	AJ6	F	299	306	Right-handed alpha
Helix 88	AJ7	F	307	311	Right-handed 310
Helix 89	AJ8	F	314	325	Right-handed alpha
Helix 90	AJ9	F	329	337	Right-handed alpha
Helix 91	AK1	F	339	350	Right-handed alpha

There are 14 sheets in PDB entry 10MZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	36	first strand
Strand 2	A	27	30	anti-parallel
Strand 3	A	17	21	anti-parallel
Strand 4	A	89	96	anti-parallel
Strand 5	A	77	86	anti-parallel
Strand 6	A	71	74	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	227	first strand
Strand 2	A	122	128	parallel
Strand 3	A	258	268	parallel
Strand 4	A	275	281	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	171	174	first strand
Strand 2	A	153	156	parallel
Strand 3	A	196	199	parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	36	first strand
Strand 2	B	24	30	anti-parallel
Strand 3	B	18	21	anti-parallel
Strand 4	B	89	96	anti-parallel
Strand 5	B	79	86	anti-parallel
Strand 6	B	68	72	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	172	175	first strand
Strand 2	B	153	157	parallel
Strand 3	B	197	200	parallel
Strand 4	B	221	224	parallel
Strand 5	B	123	126	parallel
Strand 6	B	258	267	parallel
Strand 7	B	276	281	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	27	30	anti-parallel
Strand 3	C	17	21	anti-parallel
Strand 4	C	90	96	anti-parallel
Strand 5	C	79	85	anti-parallel
Strand 6	C	71	72	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	170	173	first strand
Strand 2	C	152	156	parallel
Strand 3	C	197	200	parallel
Strand 4	C	221	227	parallel
Strand 5	C	123	128	parallel
Strand 6	C	258	266	parallel
Strand 7	C	277	281	anti-parallel

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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	37	first strand
Strand 2	D	26	30	anti-parallel
Strand 3	D	17	21	anti-parallel
Strand 4	D	89	96	anti-parallel
Strand 5	D	77	86	anti-parallel
Strand 6	D	71	74	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	221	227	first strand
Strand 2	D	122	128	parallel
Strand 3	D	258	268	parallel
Strand 4	D	275	281	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	171	174	first strand
Strand 2	D	153	156	parallel
Strand 3	D	196	199	parallel

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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	36	first strand
Strand 2	E	24	30	anti-parallel
Strand 3	E	18	21	anti-parallel
Strand 4	E	89	96	anti-parallel
Strand 5	E	79	86	anti-parallel
Strand 6	E	68	72	anti-parallel

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There are 7 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	172	175	first strand
Strand 2	E	153	157	parallel
Strand 3	E	197	200	parallel
Strand 4	E	221	224	parallel
Strand 5	E	123	126	parallel
Strand 6	E	258	267	parallel
Strand 7	E	276	281	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	35	first strand
Strand 2	F	27	30	anti-parallel
Strand 3	F	17	21	anti-parallel
Strand 4	F	90	96	anti-parallel
Strand 5	F	79	85	anti-parallel
Strand 6	F	71	72	anti-parallel

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There are 7 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	170	173	first strand
Strand 2	F	152	156	parallel
Strand 3	F	197	200	parallel
Strand 4	F	221	227	parallel
Strand 5	F	123	128	parallel
Strand 6	F	258	266	parallel
Strand 7	F	277	283	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10MZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
10MZ