Analysis of interatomic Contacts of Structural Units in PDB entry:
10OY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10OY entry

There are 3 chains in PDB entry 10OY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 5LYS 257
B
 GLY 5ILE 256
D
 GLU 95ARG 127
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 10OY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 49Right-handed alpha
Helix 2
AA2
A
53 70Right-handed alpha
Helix 3
AA3
A
84 97Right-handed alpha
Helix 4
AA4
A
108 153Right-handed alpha
Helix 5
AA5
A
155 175Right-handed alpha
Helix 6
AA6
A
177 186Right-handed alpha
Helix 7
AA7
A
189 202Right-handed alpha
Helix 8
AA8
A
222 240Right-handed alpha
Helix 9
AA9
A
246 257Right-handed alpha
Helix 10
AB1
B
6 49Right-handed alpha
Helix 11
AB2
B
53 70Right-handed alpha
Helix 12
AB3
B
84 97Right-handed alpha
Helix 13
AB4
B
108 152Right-handed alpha
Helix 14
AB5
B
157 176Right-handed alpha
Helix 15
AB6
B
176 186Right-handed alpha
Helix 16
AB7
B
189 202Right-handed alpha
Helix 17
AB8
B
222 240Right-handed alpha
Helix 18
AB9
B
247 256Right-handed alpha
Helix 19
AC1
D
96 127Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 10OY.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
242 243first strand
Strand 2
B
245 246anti-parallel
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