Analysis of interatomic Contacts of Structural Units in PDB entry:
10PS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10PS entry

There is 1 chain in PDB entry 10PS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 243TYR 798
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 10PS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
247 249Right-handed 310
Helix 2
AA2
A
307 314Right-handed 310
Helix 3
AA3
A
333 335Right-handed 310
Helix 4
AA4
A
344 349Right-handed alpha
Helix 5
AA5
A
483 487Right-handed 310
Helix 6
AA6
A
491 496Right-handed 310
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There are 8 sheets in PDB entry 10PS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 260first strand
Strand 2
A
274 283anti-parallel
Strand 3
A
352 362anti-parallel
Strand 4
A
301 302anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
325 332anti-parallel
Strand 3
A
337 342anti-parallel
Strand 4
A
292 297anti-parallel
Strand 5
A
371 380anti-parallel
Strand 6
A
383 391anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 399first strand
Strand 2
A
402 413anti-parallel
Strand 3
A
422 430anti-parallel
Strand 4
A
517 524anti-parallel
Strand 5
A
464 469anti-parallel
Strand 6
A
488 489anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 501first strand
Strand 2
A
505 513anti-parallel
Strand 3
A
437 445anti-parallel
Strand 4
A
534 542anti-parallel
Strand 5
A
549 556anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
619 625first strand
Strand 2
A
570 578anti-parallel
Strand 3
A
670 678parallel
Strand 4
A
642 643anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
607 613first strand
Strand 2
A
597 602anti-parallel
Strand 3
A
628 635anti-parallel
Strand 4
A
660 665anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
730 736first strand
Strand 2
A
682 690anti-parallel
Strand 3
A
785 789parallel
Strand 4
A
751 753anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
719 724first strand
Strand 2
A
709 713anti-parallel
Strand 3
A
739 745anti-parallel
Strand 4
A
770 775anti-parallel
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