Analysis of interatomic Contacts of Structural Units in PDB entry:
10RI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10RI entry

There are 6 chains in PDB entry 10RI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 38	ARG 190
B	GLU 38	ARG 190
C	ARG 121	ALA 755
E	LYS 26	CYS 583
F	LYS 26	CYS 583
D	ARG 121	ALA 755

There are 24 helices in PDB entry 10RI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	41	50	Right-handed alpha
Helix 2	AA2	A	59	63	Right-handed 310
Helix 3	AA3	A	149	153	Right-handed 310
Helix 4	AA4	A	167	174	Right-handed alpha
Helix 5	AA5	B	41	50	Right-handed alpha
Helix 6	AA6	B	59	63	Right-handed 310
Helix 7	AA7	B	149	153	Right-handed 310
Helix 8	AA8	B	167	174	Right-handed alpha
Helix 9	AA9	C	191	195	Right-handed alpha
Helix 10	AB1	C	300	304	Right-handed 310
Helix 11	AB2	C	391	395	Right-handed 310
Helix 12	AB3	C	427	430	Right-handed 310
Helix 13	AB4	C	464	466	Right-handed 310
Helix 14	AB5	E	287	289	Right-handed 310
Helix 15	AB6	E	298	307	Right-handed 310
Helix 16	AB7	E	458	463	Right-handed alpha
Helix 17	AB8	F	287	289	Right-handed 310
Helix 18	AB9	F	298	307	Right-handed 310
Helix 19	AC1	F	458	463	Right-handed alpha
Helix 20	AC2	D	191	195	Right-handed alpha
Helix 21	AC3	D	300	304	Right-handed 310
Helix 22	AC4	D	391	395	Right-handed 310
Helix 23	AC5	D	427	430	Right-handed 310
Helix 24	AC6	D	464	466	Right-handed 310

There are 64 sheets in PDB entry 10RI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4, AG5, AG6, AG7, AG8, AG9, AH1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	B	91	109	parallel
Strand 3	B	71	73	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	B	91	109	parallel
Strand 3	B	113	131	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	52	58	first strand
Strand 2	A	77	83	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	91	109	anti-parallel
Strand 3	A	113	131	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	73	first strand
Strand 2	A	91	109	anti-parallel
Strand 3	B	39	40	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	154	155	first strand
Strand 2	A	162	163	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	178	first strand
Strand 2	A	185	188	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	58	first strand
Strand 2	B	77	83	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	154	155	first strand
Strand 2	B	162	163	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	178	first strand
Strand 2	B	185	188	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	139	first strand
Strand 2	C	215	219	parallel
Strand 3	C	199	206	anti-parallel
Strand 4	C	162	166	anti-parallel
Strand 5	C	170	172	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	135	139	first strand
Strand 2	C	215	219	parallel
Strand 3	C	199	206	anti-parallel
Strand 4	C	209	212	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	147	150	first strand
Strand 2	C	186	190	anti-parallel
Strand 3	C	180	182	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	225	231	first strand
Strand 2	C	244	252	anti-parallel
Strand 3	C	288	296	anti-parallel
Strand 4	C	272	279	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	236	239	first strand
Strand 2	C	317	327	parallel
Strand 3	C	305	312	anti-parallel
Strand 4	C	259	263	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	331	334	first strand
Strand 2	C	356	359	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	341	345	first strand
Strand 2	C	410	425	parallel
Strand 3	C	443	452	anti-parallel
Strand 4	C	508	517	anti-parallel
Strand 5	C	495	497	anti-parallel

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There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	371	372	first strand
Strand 2	C	363	368	anti-parallel
Strand 3	C	396	403	anti-parallel
Strand 4	C	410	425	anti-parallel
Strand 5	C	443	452	anti-parallel
Strand 6	C	508	517	anti-parallel
Strand 7	C	501	505	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	350	353	first strand
Strand 2	C	384	387	anti-parallel
Strand 3	C	378	381	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	437	438	first strand
Strand 2	C	545	546	parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	484	485	first strand
Strand 2	C	459	463	anti-parallel
Strand 3	C	524	532	anti-parallel
Strand 4	C	535	543	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	468	470	first strand
Strand 2	C	478	480	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	550	554	first strand
Strand 2	C	566	572	anti-parallel
Strand 3	C	620	625	anti-parallel
Strand 4	C	613	616	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	608	610	first strand
Strand 2	C	576	583	anti-parallel
Strand 3	C	637	644	anti-parallel
Strand 4	C	650	656	anti-parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	674	677	first strand
Strand 2	C	743	753	parallel
Strand 3	C	732	738	anti-parallel
Strand 4	C	695	700	anti-parallel
Strand 5	C	703	704	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	685	first strand
Strand 2	C	719	723	anti-parallel
Strand 3	C	711	714	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	29	32	first strand
Strand 2	E	53	59	parallel
Strand 3	E	118	124	anti-parallel
Strand 4	E	86	91	anti-parallel
Strand 5	E	98	99	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	37	40	first strand
Strand 2	E	135	140	anti-parallel
Strand 3	E	67	71	anti-parallel
Strand 4	E	112	113	anti-parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	151	first strand
Strand 2	E	172	178	parallel
Strand 3	E	242	248	anti-parallel
Strand 4	E	210	215	anti-parallel
Strand 5	E	223	227	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	155	159	first strand
Strand 2	E	257	264	anti-parallel
Strand 3	E	185	193	anti-parallel
Strand 4	E	235	238	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	277	278	first strand
Strand 2	E	420	424	anti-parallel
Strand 3	E	326	341	anti-parallel
Strand 4	E	391	410	anti-parallel
Strand 5	E	357	363	anti-parallel
Strand 6	E	370	371	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	291	293	first strand
Strand 2	E	326	341	anti-parallel
Strand 3	E	391	410	anti-parallel
Strand 4	E	357	363	anti-parallel
Strand 5	E	380	382	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	344	345	first strand
Strand 2	E	352	353	anti-parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	373	374	first strand
Strand 2	E	377	378	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	447	449	first strand
Strand 2	E	485	501	anti-parallel
Strand 3	E	557	569	anti-parallel
Strand 4	E	512	520	anti-parallel
Strand 5	E	540	541	anti-parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	471	473	first strand
Strand 2	E	574	583	anti-parallel
Strand 3	E	485	501	anti-parallel
Strand 4	E	550	552	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	503	505	first strand
Strand 2	E	508	510	anti-parallel

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There are 5 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	29	32	first strand
Strand 2	F	53	59	parallel
Strand 3	F	118	124	anti-parallel
Strand 4	F	86	91	anti-parallel
Strand 5	F	98	99	anti-parallel

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There are 4 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	37	40	first strand
Strand 2	F	135	140	anti-parallel
Strand 3	F	67	71	anti-parallel
Strand 4	F	112	113	anti-parallel

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There are 5 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	149	151	first strand
Strand 2	F	172	178	parallel
Strand 3	F	242	248	anti-parallel
Strand 4	F	210	215	anti-parallel
Strand 5	F	223	227	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	155	159	first strand
Strand 2	F	257	264	anti-parallel
Strand 3	F	185	193	anti-parallel
Strand 4	F	235	238	anti-parallel

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There are 6 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	277	278	first strand
Strand 2	F	420	424	anti-parallel
Strand 3	F	326	341	anti-parallel
Strand 4	F	391	410	anti-parallel
Strand 5	F	357	363	anti-parallel
Strand 6	F	370	371	anti-parallel

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There are 5 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	291	293	first strand
Strand 2	F	326	341	anti-parallel
Strand 3	F	391	410	anti-parallel
Strand 4	F	357	363	anti-parallel
Strand 5	F	380	382	anti-parallel

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There are 2 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	344	345	first strand
Strand 2	F	352	353	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	373	374	first strand
Strand 2	F	377	378	anti-parallel

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There are 5 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	447	449	first strand
Strand 2	F	485	501	anti-parallel
Strand 3	F	557	569	anti-parallel
Strand 4	F	512	520	anti-parallel
Strand 5	F	540	541	anti-parallel

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There are 4 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	471	473	first strand
Strand 2	F	574	583	anti-parallel
Strand 3	F	485	501	anti-parallel
Strand 4	F	550	552	anti-parallel

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There are 2 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	503	505	first strand
Strand 2	F	508	510	anti-parallel

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There are 5 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	215	219	parallel
Strand 3	D	199	206	anti-parallel
Strand 4	D	162	166	anti-parallel
Strand 5	D	170	172	anti-parallel

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There are 4 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	135	139	first strand
Strand 2	D	215	219	parallel
Strand 3	D	199	206	anti-parallel
Strand 4	D	209	212	anti-parallel

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There are 3 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	147	150	first strand
Strand 2	D	186	190	anti-parallel
Strand 3	D	180	182	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	225	231	first strand
Strand 2	D	244	252	anti-parallel
Strand 3	D	288	296	anti-parallel
Strand 4	D	272	279	anti-parallel

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There are 4 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	236	239	first strand
Strand 2	D	317	327	parallel
Strand 3	D	305	312	anti-parallel
Strand 4	D	259	263	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	331	334	first strand
Strand 2	D	356	359	anti-parallel

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There are 5 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	341	345	first strand
Strand 2	D	410	425	parallel
Strand 3	D	443	452	anti-parallel
Strand 4	D	508	517	anti-parallel
Strand 5	D	495	497	anti-parallel

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There are 7 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	371	372	first strand
Strand 2	D	363	368	anti-parallel
Strand 3	D	396	403	anti-parallel
Strand 4	D	410	425	anti-parallel
Strand 5	D	443	452	anti-parallel
Strand 6	D	508	517	anti-parallel
Strand 7	D	501	505	anti-parallel

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There are 3 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	350	353	first strand
Strand 2	D	384	387	anti-parallel
Strand 3	D	378	381	anti-parallel

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There are 2 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	437	438	first strand
Strand 2	D	545	546	parallel

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There are 4 strands in AG5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	484	485	first strand
Strand 2	D	459	463	anti-parallel
Strand 3	D	524	532	anti-parallel
Strand 4	D	535	543	anti-parallel

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There are 2 strands in AG6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	468	470	first strand
Strand 2	D	478	480	anti-parallel

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There are 4 strands in AG7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	550	554	first strand
Strand 2	D	566	572	anti-parallel
Strand 3	D	620	625	anti-parallel
Strand 4	D	613	616	anti-parallel

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There are 4 strands in AG8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	608	610	first strand
Strand 2	D	576	583	anti-parallel
Strand 3	D	637	644	anti-parallel
Strand 4	D	650	656	anti-parallel

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There are 5 strands in AG9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	674	677	first strand
Strand 2	D	743	753	parallel
Strand 3	D	732	738	anti-parallel
Strand 4	D	695	700	anti-parallel
Strand 5	D	703	704	anti-parallel

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There are 3 strands in AH1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	681	685	first strand
Strand 2	D	719	723	anti-parallel
Strand 3	D	711	714	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10RI

Analysis of interatomic Contacts of Structural Units in PDB entry:
10RI