Analysis of interatomic Contacts of Structural Units in PDB entry:
10RR

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10RR entry

There are 6 chains in PDB entry 10RR (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 41	LEU 675
B	LEU 111	THR 664
C	C 1	A 3
D	ILE 41	LEU 675
E	LEU 111	THR 664
F	C 1	A 3

There are 46 helices in PDB entry 10RR. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	48	56	Right-handed alpha
Helix 2	AA2	A	66	79	Right-handed alpha
Helix 3	AA3	A	88	100	Right-handed alpha
Helix 4	AA4	A	108	126	Right-handed alpha
Helix 5	AA5	A	150	159	Right-handed alpha
Helix 6	AA6	A	168	184	Right-handed alpha
Helix 7	AA7	A	628	633	Right-handed alpha
Helix 8	AA8	A	646	650	Right-handed 310
Helix 9	AA9	B	187	199	Right-handed alpha
Helix 10	AB1	B	204	212	Right-handed alpha
Helix 11	AB2	B	229	238	Right-handed alpha
Helix 12	AB3	B	241	245	Right-handed 310
Helix 13	AB4	B	255	265	Right-handed alpha
Helix 14	AB5	B	278	294	Right-handed alpha
Helix 15	AB6	B	311	325	Right-handed alpha
Helix 16	AB7	B	383	395	Right-handed alpha
Helix 17	AB8	B	413	426	Right-handed alpha
Helix 18	AB9	B	446	452	Right-handed alpha
Helix 19	AC1	B	511	529	Right-handed alpha
Helix 20	AC2	B	530	532	Right-handed 310
Helix 21	AC3	B	541	545	Right-handed 310
Helix 22	AC4	B	565	572	Right-handed 310
Helix 23	AC5	B	628	633	Right-handed alpha
Helix 24	AC6	D	48	56	Right-handed alpha
Helix 25	AC7	D	66	79	Right-handed alpha
Helix 26	AC8	D	88	100	Right-handed alpha
Helix 27	AC9	D	108	126	Right-handed alpha
Helix 28	AD1	D	150	159	Right-handed alpha
Helix 29	AD2	D	168	184	Right-handed alpha
Helix 30	AD3	D	628	633	Right-handed alpha
Helix 31	AD4	D	646	650	Right-handed 310
Helix 32	AD5	E	187	199	Right-handed alpha
Helix 33	AD6	E	204	212	Right-handed alpha
Helix 34	AD7	E	229	238	Right-handed alpha
Helix 35	AD8	E	241	245	Right-handed 310
Helix 36	AD9	E	255	265	Right-handed alpha
Helix 37	AE1	E	278	294	Right-handed alpha
Helix 38	AE2	E	311	325	Right-handed alpha
Helix 39	AE3	E	383	395	Right-handed alpha
Helix 40	AE4	E	413	426	Right-handed alpha
Helix 41	AE5	E	446	452	Right-handed alpha
Helix 42	AE6	E	511	529	Right-handed alpha
Helix 43	AE7	E	530	532	Right-handed 310
Helix 44	AE8	E	541	545	Right-handed 310
Helix 45	AE9	E	565	572	Right-handed 310
Helix 46	AF1	E	628	633	Right-handed alpha

There are 14 sheets in PDB entry 10RR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	639	640	first strand
Strand 2	B	548	549	anti-parallel

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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	671	673	first strand
Strand 2	B	595	597	parallel
Strand 3	B	556	559	parallel
Strand 4	B	639	640	parallel
Strand 5	B	577	581	anti-parallel
Strand 6	B	605	615	anti-parallel
Strand 7	B	620	624	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	117	120	first strand
Strand 2	B	123	127	anti-parallel
Strand 3	B	221	226	anti-parallel
Strand 4	B	134	146	anti-parallel
Strand 5	B	174	176	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	163	167	first strand
Strand 2	B	134	146	anti-parallel
Strand 3	B	267	268	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	149	151	first strand
Strand 2	B	154	156	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	330	332	first strand
Strand 2	B	351	353	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	347	348	first strand
Strand 2	B	372	373	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	639	640	first strand
Strand 2	E	548	549	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	671	673	first strand
Strand 2	E	595	597	parallel
Strand 3	E	556	559	parallel
Strand 4	E	639	640	parallel
Strand 5	E	577	581	anti-parallel
Strand 6	E	605	615	anti-parallel
Strand 7	E	620	624	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	117	120	first strand
Strand 2	E	123	127	anti-parallel
Strand 3	E	221	226	anti-parallel
Strand 4	E	134	146	anti-parallel
Strand 5	E	174	176	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	163	167	first strand
Strand 2	E	134	146	anti-parallel
Strand 3	E	267	268	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	149	151	first strand
Strand 2	E	154	156	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	330	332	first strand
Strand 2	E	351	353	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	347	348	first strand
Strand 2	E	372	373	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10RR

Analysis of interatomic Contacts of Structural Units in PDB entry:
10RR