Analysis of interatomic Contacts of Structural Units in PDB entry:
10SM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10SM entry

There are 2 chains in PDB entry 10SM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 204ASN 298
D
 GLU 23ILE 1041
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 10SM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
208 219Right-handed alpha
Helix 2
AA2
A
220 223Right-handed 310
Helix 3
AA3
A
241 254Right-handed alpha
Helix 4
AA4
A
259 269Right-handed alpha
Helix 5
AA5
A
270 272Right-handed 310
Helix 6
AA6
D
24 34Right-handed alpha
Helix 7
AA7
D
36 52Right-handed alpha
Helix 8
AA8
D
53 64Right-handed alpha
Helix 9
AA9
D
70 88Right-handed alpha
Helix 10
AB1
D
102 113Right-handed alpha
Helix 11
AB2
D
114 119Right-handed alpha
Helix 12
AB3
D
121 158Right-handed alpha
Helix 13
AB4
D
158 174Right-handed alpha
Helix 14
AB5
D
181 199Right-handed alpha
Helix 15
AB6
D
204 224Right-handed alpha
Helix 16
AB7
D
227 237Right-handed alpha
Helix 17
AB8
D
237 254Right-handed alpha
Helix 18
AB9
D
261 277Right-handed alpha
Helix 19
AC1
D
279 285Right-handed alpha
Helix 20
AC2
D
286 310Right-handed alpha
Helix 21
AC3
D
328 346Right-handed alpha
Helix 22
AC4
D
349 368Right-handed alpha
Helix 23
AC5
D
371 381Right-handed alpha
Helix 24
AC6
D
381 390Right-handed alpha
Helix 25
AC7
D
397 411Right-handed alpha
Helix 26
AC8
D
413 438Right-handed alpha
Helix 27
AC9
D
440 442Right-handed 310
Helix 28
AD1
D
443 457Right-handed alpha
Helix 29
AD2
D
457 468Right-handed alpha
Helix 30
AD3
D
473 481Right-handed alpha
Helix 31
AD4
D
481 488Right-handed alpha
Helix 32
AD5
D
491 504Right-handed alpha
Helix 33
AD6
D
505 509Right-handed 310
Helix 34
AD7
D
510 525Right-handed alpha
Helix 35
AD8
D
530 552Right-handed alpha
Helix 36
AD9
D
553 559Right-handed 310
Helix 37
AE1
D
560 573Right-handed alpha
Helix 38
AE2
D
577 592Right-handed alpha
Helix 39
AE3
D
594 616Right-handed alpha
Helix 40
AE4
D
619 635Right-handed alpha
Helix 41
AE5
D
639 657Right-handed alpha
Helix 42
AE6
D
658 662Right-handed 310
Helix 43
AE7
D
665 680Right-handed alpha
Helix 44
AE8
D
686 704Right-handed alpha
Helix 45
AE9
D
706 723Right-handed alpha
Helix 46
AF1
D
724 731Right-handed alpha
Helix 47
AF2
D
738 751Right-handed alpha
Helix 48
AF3
D
756 761Right-handed 310
Helix 49
AF4
D
762 775Right-handed alpha
Helix 50
AF5
D
778 780Right-handed 310
Helix 51
AF6
D
781 796Right-handed alpha
Helix 52
AF7
D
798 814Right-handed alpha
Helix 53
AF8
D
816 827Right-handed alpha
Helix 54
AF9
D
834 848Right-handed alpha
Helix 55
AG1
D
852 874Right-handed alpha
Helix 56
AG2
D
875 880Right-handed alpha
Helix 57
AG3
D
913 934Right-handed alpha
Helix 58
AG4
D
997 1002Right-handed 310
Helix 59
AG5
D
1003 1017Right-handed alpha
Helix 60
AG6
D
1020 1028Right-handed alpha
Helix 61
AG7
D
1029 1040Right-handed alpha
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There are 2 sheets in PDB entry 10SM. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
227 231first strand
Strand 2
A
236 239anti-parallel
Strand 3
A
285 288anti-parallel
Strand 4
A
276 278anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
882 884first strand
Strand 2
D
910 912anti-parallel
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