Analysis of interatomic Contacts of Structural Units in PDB entry:
10TY

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10TY entry

There are 4 chains in PDB entry 10TY (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 17	CYS 497
B	SER 17	CYS 497
C	PHE 18	CYS 497
D	VAL 19	CYS 497

There are 88 helices in PDB entry 10TY. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	24	Right-handed 310
Helix 2	AA2	A	25	43	Right-handed alpha
Helix 3	AA3	A	63	78	Right-handed alpha
Helix 4	AA4	A	88	92	Right-handed 310
Helix 5	AA5	A	109	120	Right-handed alpha
Helix 6	AA6	A	138	142	Right-handed 310
Helix 7	AA7	A	149	157	Right-handed alpha
Helix 8	AA8	A	171	176	Right-handed alpha
Helix 9	AA9	A	188	192	Right-handed 310
Helix 10	AB1	A	193	199	Right-handed alpha
Helix 11	AB2	A	203	211	Right-handed alpha
Helix 12	AB3	A	222	226	Right-handed 310
Helix 13	AB4	A	251	259	Right-handed alpha
Helix 14	AB5	A	271	278	Right-handed alpha
Helix 15	AB6	A	279	283	Right-handed 310
Helix 16	AB7	A	297	301	Right-handed 310
Helix 17	AB8	A	308	321	Right-handed alpha
Helix 18	AB9	A	335	342	Right-handed alpha
Helix 19	AC1	A	344	366	Right-handed alpha
Helix 20	AC2	A	430	434	Right-handed 310
Helix 21	AC3	A	467	471	Right-handed 310
Helix 22	AC4	A	478	489	Right-handed alpha
Helix 23	AC5	B	20	24	Right-handed 310
Helix 24	AC6	B	25	43	Right-handed alpha
Helix 25	AC7	B	63	78	Right-handed alpha
Helix 26	AC8	B	88	92	Right-handed 310
Helix 27	AC9	B	109	120	Right-handed alpha
Helix 28	AD1	B	138	143	Right-handed 310
Helix 29	AD2	B	149	157	Right-handed alpha
Helix 30	AD3	B	171	176	Right-handed alpha
Helix 31	AD4	B	188	192	Right-handed 310
Helix 32	AD5	B	193	199	Right-handed alpha
Helix 33	AD6	B	203	211	Right-handed alpha
Helix 34	AD7	B	222	226	Right-handed 310
Helix 35	AD8	B	239	243	Right-handed 310
Helix 36	AD9	B	251	259	Right-handed alpha
Helix 37	AE1	B	271	278	Right-handed alpha
Helix 38	AE2	B	279	283	Right-handed 310
Helix 39	AE3	B	297	301	Right-handed 310
Helix 40	AE4	B	308	321	Right-handed alpha
Helix 41	AE5	B	335	342	Right-handed alpha
Helix 42	AE6	B	344	366	Right-handed alpha
Helix 43	AE7	B	430	434	Right-handed 310
Helix 44	AE8	B	467	471	Right-handed 310
Helix 45	AE9	B	478	489	Right-handed alpha
Helix 46	AF1	C	20	24	Right-handed 310
Helix 47	AF2	C	25	43	Right-handed alpha
Helix 48	AF3	C	63	78	Right-handed alpha
Helix 49	AF4	C	88	92	Right-handed 310
Helix 50	AF5	C	109	120	Right-handed alpha
Helix 51	AF6	C	138	142	Right-handed 310
Helix 52	AF7	C	149	157	Right-handed alpha
Helix 53	AF8	C	171	176	Right-handed alpha
Helix 54	AF9	C	188	192	Right-handed 310
Helix 55	AG1	C	193	199	Right-handed alpha
Helix 56	AG2	C	203	211	Right-handed alpha
Helix 57	AG3	C	222	227	Right-handed 310
Helix 58	AG4	C	251	259	Right-handed alpha
Helix 59	AG5	C	271	278	Right-handed alpha
Helix 60	AG6	C	279	283	Right-handed 310
Helix 61	AG7	C	297	301	Right-handed 310
Helix 62	AG8	C	308	321	Right-handed alpha
Helix 63	AG9	C	335	342	Right-handed alpha
Helix 64	AH1	C	344	366	Right-handed alpha
Helix 65	AH2	C	467	471	Right-handed 310
Helix 66	AH3	C	478	489	Right-handed alpha
Helix 67	AH4	D	20	24	Right-handed 310
Helix 68	AH5	D	25	43	Right-handed alpha
Helix 69	AH6	D	63	78	Right-handed alpha
Helix 70	AH7	D	88	92	Right-handed 310
Helix 71	AH8	D	109	120	Right-handed alpha
Helix 72	AH9	D	138	142	Right-handed 310
Helix 73	AI1	D	149	157	Right-handed alpha
Helix 74	AI2	D	171	176	Right-handed alpha
Helix 75	AI3	D	188	192	Right-handed 310
Helix 76	AI4	D	193	199	Right-handed alpha
Helix 77	AI5	D	203	211	Right-handed alpha
Helix 78	AI6	D	223	227	Right-handed 310
Helix 79	AI7	D	239	243	Right-handed 310
Helix 80	AI8	D	251	259	Right-handed alpha
Helix 81	AI9	D	271	276	Right-handed alpha
Helix 82	AJ1	D	297	301	Right-handed 310
Helix 83	AJ2	D	308	321	Right-handed alpha
Helix 84	AJ3	D	335	342	Right-handed alpha
Helix 85	AJ4	D	344	366	Right-handed alpha
Helix 86	AJ5	D	430	434	Right-handed 310
Helix 87	AJ6	D	467	471	Right-handed 310
Helix 88	AJ7	D	478	489	Right-handed alpha

There are 16 sheets in PDB entry 10TY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	266	269	first strand
Strand 2	A	285	289	parallel
Strand 3	A	217	221	parallel
Strand 4	A	160	168	parallel
Strand 5	A	327	332	parallel
Strand 6	A	53	58	parallel
Strand 7	A	371	376	parallel
Strand 8	A	459	464	anti-parallel
Strand 9	A	94	99	anti-parallel
Strand 10	A	474	476	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	380	381	first strand
Strand 2	A	454	455	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	383	385	first strand
Strand 2	A	413	418	anti-parallel
Strand 3	A	445	448	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	423	424	first strand
Strand 2	A	427	428	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	266	269	first strand
Strand 2	B	285	289	parallel
Strand 3	B	217	221	parallel
Strand 4	B	160	168	parallel
Strand 5	B	327	332	parallel
Strand 6	B	53	58	parallel
Strand 7	B	371	376	parallel
Strand 8	B	459	464	anti-parallel
Strand 9	B	94	99	anti-parallel
Strand 10	B	474	476	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	380	381	first strand
Strand 2	B	454	455	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	383	385	first strand
Strand 2	B	413	417	anti-parallel
Strand 3	B	445	447	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	423	424	first strand
Strand 2	B	427	428	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	266	269	first strand
Strand 2	C	285	289	parallel
Strand 3	C	217	221	parallel
Strand 4	C	160	168	parallel
Strand 5	C	327	332	parallel
Strand 6	C	53	58	parallel
Strand 7	C	371	376	parallel
Strand 8	C	459	464	anti-parallel
Strand 9	C	94	99	anti-parallel
Strand 10	C	474	476	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	381	first strand
Strand 2	C	454	455	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	383	385	first strand
Strand 2	C	413	415	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	423	424	first strand
Strand 2	C	427	428	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	266	269	first strand
Strand 2	D	285	289	parallel
Strand 3	D	217	221	parallel
Strand 4	D	160	168	parallel
Strand 5	D	327	332	parallel
Strand 6	D	53	59	parallel
Strand 7	D	371	377	parallel
Strand 8	D	459	464	anti-parallel
Strand 9	D	94	99	anti-parallel
Strand 10	D	474	476	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	380	381	first strand
Strand 2	D	454	455	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	383	385	first strand
Strand 2	D	413	417	anti-parallel
Strand 3	D	445	447	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	423	424	first strand
Strand 2	D	427	428	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10TY

Analysis of interatomic Contacts of Structural Units in PDB entry:
10TY