Analysis of interatomic Contacts of Structural Units in PDB entry:
10UR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10UR entry

There is 1 chain in PDB entry 10UR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 904PRO 1128
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 10UR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
961 968Right-handed alpha
Helix 2
AA2
A
978 987Right-handed alpha
Helix 3
AA3
A
1003 1010Right-handed alpha
Helix 4
AA4
A
1047 1059Right-handed alpha
Helix 5
AA5
A
1111 1115Right-handed alpha
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There are 4 sheets in PDB entry 10UR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1036 1042first strand
Strand 2
A
940 946anti-parallel
Strand 3
A
918 922anti-parallel
Strand 4
A
1116 1119parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
924 927first strand
Strand 2
A
1121 1126parallel
Strand 3
A
1068 1075anti-parallel
Strand 4
A
953 959anti-parallel
Strand 5
A
1062 1063first strand
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
999 1002first strand
Strand 2
A
1015 1021anti-parallel
Strand 3
A
953 959anti-parallel
Strand 4
A
1068 1075anti-parallel
Strand 5
A
1101 1102first strand
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1080 1086first strand
Strand 2
A
1092 1098anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il