Analysis of interatomic Contacts of Structural Units in PDB entry:
10UT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10UT entry

There are 2 chains in PDB entry 10UT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 340GLY 476
B
 ASP 340GLY 476
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 10UT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
353 359Right-handed alpha
Helix 2
AA2
B
352 359Right-handed alpha
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There are 8 sheets in PDB entry 10UT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 392first strand
Strand 2
A
424 432anti-parallel
Strand 3
A
362 369anti-parallel
Strand 4
A
342 346anti-parallel
Strand 5
A
465 468parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
348 352first strand
Strand 2
A
470 475parallel
Strand 3
A
442 445anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 403first strand
Strand 2
A
407 414anti-parallel
Strand 3
A
375 381anti-parallel
Strand 4
A
447 448anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 403first strand
Strand 2
A
407 414anti-parallel
Strand 3
A
375 381anti-parallel
Strand 4
A
454 457anti-parallel
Strand 5
A
460 462anti-parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
387 392first strand
Strand 2
B
424 432anti-parallel
Strand 3
B
362 369anti-parallel
Strand 4
B
342 346anti-parallel
Strand 5
B
465 468parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
348 351first strand
Strand 2
B
470 474parallel
Strand 3
B
442 445anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 403first strand
Strand 2
B
407 414anti-parallel
Strand 3
B
375 381anti-parallel
Strand 4
B
447 448anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
397 403first strand
Strand 2
B
407 414anti-parallel
Strand 3
B
375 381anti-parallel
Strand 4
B
454 457anti-parallel
Strand 5
B
460 462anti-parallel
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