Analysis of interatomic Contacts of Structural Units in PDB entry:
10UV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10UV entry

There are 2 chains in PDB entry 10UV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 547ALA 684
B
 LYS 547PRO 685
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 10UV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
560 566Right-handed alpha
Helix 2
AA2
B
560 566Right-handed alpha
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There are 6 sheets in PDB entry 10UV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
593 599first strand
Strand 2
A
626 634anti-parallel
Strand 3
A
568 575anti-parallel
Strand 4
A
550 553anti-parallel
Strand 5
A
673 675parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 559first strand
Strand 2
A
677 682parallel
Strand 3
A
644 650anti-parallel
Strand 4
A
579 588anti-parallel
Strand 5
A
612 623anti-parallel
Strand 6
A
603 609anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
556 559first strand
Strand 2
A
677 682parallel
Strand 3
A
644 650anti-parallel
Strand 4
A
579 588anti-parallel
Strand 5
A
660 662anti-parallel
Strand 6
A
669 670anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
593 599first strand
Strand 2
B
626 634anti-parallel
Strand 3
B
568 575anti-parallel
Strand 4
B
550 553anti-parallel
Strand 5
B
673 675parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
556 559first strand
Strand 2
B
677 682parallel
Strand 3
B
644 650anti-parallel
Strand 4
B
579 588anti-parallel
Strand 5
B
612 623anti-parallel
Strand 6
B
603 609anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
556 559first strand
Strand 2
B
677 682parallel
Strand 3
B
644 650anti-parallel
Strand 4
B
579 588anti-parallel
Strand 5
B
661 663anti-parallel
Strand 6
B
668 670anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il