Analysis of interatomic Contacts of Structural Units in PDB entry:
10UW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 10UW entry

There are 4 chains in PDB entry 10UW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 52VAL 197
B
 HIS 44VAL 197
C
 TYR 53VAL 197
D
 LYS 42VAL 197
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 6 helices in PDB entry 10UW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
69 75Right-handed alpha
Helix 2
AA2
B
49 54Right-handed alpha
Helix 3
AA3
B
69 75Right-handed alpha
Helix 4
AA4
C
69 75Right-handed alpha
Helix 5
AA5
D
49 54Right-handed alpha
Helix 6
AA6
D
69 75Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 10UW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
105 111first strand
Strand 2
A
143 151anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
59 62anti-parallel
Strand 5
A
188 190parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
192 197parallel
Strand 3
A
160 166anti-parallel
Strand 4
A
91 99anti-parallel
Strand 5
A
129 139anti-parallel
Strand 6
A
120 123anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 68first strand
Strand 2
A
192 197parallel
Strand 3
A
160 166anti-parallel
Strand 4
A
91 99anti-parallel
Strand 5
A
176 178anti-parallel
Strand 6
A
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
105 111first strand
Strand 2
B
143 151anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
59 62anti-parallel
Strand 5
B
188 190parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
192 197parallel
Strand 3
B
160 166anti-parallel
Strand 4
B
91 99anti-parallel
Strand 5
B
129 139anti-parallel
Strand 6
B
120 123anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 68first strand
Strand 2
B
192 197parallel
Strand 3
B
160 166anti-parallel
Strand 4
B
91 99anti-parallel
Strand 5
B
176 178anti-parallel
Strand 6
B
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
105 111first strand
Strand 2
C
143 151anti-parallel
Strand 3
C
78 84anti-parallel
Strand 4
C
59 62anti-parallel
Strand 5
C
188 190parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 68first strand
Strand 2
C
192 197parallel
Strand 3
C
160 166anti-parallel
Strand 4
C
91 100anti-parallel
Strand 5
C
129 139anti-parallel
Strand 6
C
120 123anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 68first strand
Strand 2
C
192 197parallel
Strand 3
C
160 166anti-parallel
Strand 4
C
91 100anti-parallel
Strand 5
C
176 178anti-parallel
Strand 6
C
184 186anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
65 68anti-parallel
Strand 3
D
192 197parallel
Strand 4
D
160 166anti-parallel
Strand 5
D
91 99anti-parallel
Strand 6
D
129 139anti-parallel
Strand 7
D
120 123anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
43 45first strand
Strand 2
D
65 68anti-parallel
Strand 3
D
192 197parallel
Strand 4
D
160 166anti-parallel
Strand 5
D
91 99anti-parallel
Strand 6
D
176 178anti-parallel
Strand 7
D
184 185anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
105 111first strand
Strand 2
D
143 151anti-parallel
Strand 3
D
78 84anti-parallel
Strand 4
D
59 62anti-parallel
Strand 5
D
188 190parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il