Analysis of interatomic Contacts of Structural Units in PDB entry:
10UX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10UX entry

There are 12 chains in PDB entry 10UX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 198	SER 249
A	VAL 251	THR 303
A	PRO 305	THR 346
B	GLY 198	SER 249
B	VAL 251	THR 303
B	PRO 305	THR 346
C	SER 199	SER 249
C	VAL 251	THR 303
C	PRO 305	THR 346
D	SER 199	SER 249
D	VAL 251	THR 303
D	PRO 305	THR 346

There are 4 helices in PDB entry 10UX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	214	221	Right-handed alpha
Helix 2	AA2	B	214	221	Right-handed alpha
Helix 3	AA3	C	214	221	Right-handed alpha
Helix 4	AA4	D	214	221	Right-handed alpha

There are 16 sheets in PDB entry 10UX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	254	first strand
Strand 2	A	291	298	anti-parallel
Strand 3	A	224	234	anti-parallel
Strand 4	A	203	208	anti-parallel
Strand 5	A	333	337	parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	339	342	parallel
Strand 3	A	308	314	anti-parallel
Strand 4	A	237	245	anti-parallel
Strand 5	A	276	287	anti-parallel
Strand 6	A	264	271	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	210	211	first strand
Strand 2	A	339	342	parallel
Strand 3	A	308	314	anti-parallel
Strand 4	A	237	245	anti-parallel
Strand 5	A	323	325	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	316	317	first strand
Strand 2	A	320	321	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	252	254	first strand
Strand 2	B	291	298	anti-parallel
Strand 3	B	224	234	anti-parallel
Strand 4	B	203	208	anti-parallel
Strand 5	B	333	337	parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	211	first strand
Strand 2	B	339	342	parallel
Strand 3	B	308	314	anti-parallel
Strand 4	B	237	245	anti-parallel
Strand 5	B	276	287	anti-parallel
Strand 6	B	264	271	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	210	211	first strand
Strand 2	B	339	342	parallel
Strand 3	B	308	314	anti-parallel
Strand 4	B	237	245	anti-parallel
Strand 5	B	323	325	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	316	317	first strand
Strand 2	B	320	321	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	254	first strand
Strand 2	C	291	298	anti-parallel
Strand 3	C	224	234	anti-parallel
Strand 4	C	203	208	anti-parallel
Strand 5	C	333	337	parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	339	342	parallel
Strand 3	C	308	314	anti-parallel
Strand 4	C	237	245	anti-parallel
Strand 5	C	276	287	anti-parallel
Strand 6	C	264	271	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	210	211	first strand
Strand 2	C	339	342	parallel
Strand 3	C	308	314	anti-parallel
Strand 4	C	237	245	anti-parallel
Strand 5	C	323	325	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	316	317	first strand
Strand 2	C	320	321	anti-parallel

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There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	252	254	first strand
Strand 2	D	291	298	anti-parallel
Strand 3	D	224	234	anti-parallel
Strand 4	D	203	208	anti-parallel
Strand 5	D	333	337	parallel

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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	339	342	parallel
Strand 3	D	308	314	anti-parallel
Strand 4	D	237	245	anti-parallel
Strand 5	D	276	287	anti-parallel
Strand 6	D	264	271	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	210	211	first strand
Strand 2	D	339	342	parallel
Strand 3	D	308	314	anti-parallel
Strand 4	D	237	245	anti-parallel
Strand 5	D	323	325	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	316	317	first strand
Strand 2	D	320	321	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10UX

Analysis of interatomic Contacts of Structural Units in PDB entry:
10UX