Analysis of interatomic Contacts of Structural Units in PDB entry:
10ZL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 10ZL entry

There are 4 chains in PDB entry 10ZL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	PRO 2	ARG 511
D	PRO 2	ARG 511
A	ASP 6	LYS 496
C	ASP 6	LYS 496

There are102 helices in PDB entry 10ZL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	10	15	Right-handed alpha
Helix 2	AA2	B	17	29	Right-handed alpha
Helix 3	AA3	B	35	46	Right-handed alpha
Helix 4	AA4	B	48	57	Right-handed alpha
Helix 5	AA5	B	69	79	Right-handed alpha
Helix 6	AA6	B	91	107	Right-handed alpha
Helix 7	AA7	B	120	125	Right-handed alpha
Helix 8	AA8	B	126	142	Right-handed alpha
Helix 9	AA9	B	151	158	Right-handed alpha
Helix 10	AB1	B	160	172	Right-handed alpha
Helix 11	AB2	B	191	209	Right-handed alpha
Helix 12	AB3	B	228	244	Right-handed alpha
Helix 13	AB4	B	255	259	Right-handed 310
Helix 14	AB5	B	273	280	Right-handed alpha
Helix 15	AB6	B	281	283	Right-handed 310
Helix 16	AB7	B	290	293	Right-handed 310
Helix 17	AB8	B	294	303	Right-handed alpha
Helix 18	AB9	B	315	332	Right-handed alpha
Helix 19	AC1	B	336	354	Right-handed alpha
Helix 20	AC2	B	355	357	Right-handed 310
Helix 21	AC3	B	367	381	Right-handed alpha
Helix 22	AC4	B	394	407	Right-handed alpha
Helix 23	AC5	B	408	412	Right-handed 310
Helix 24	AC6	B	421	432	Right-handed alpha
Helix 25	AC7	B	440	442	Right-handed 310
Helix 26	AC8	B	443	451	Right-handed alpha
Helix 27	AC9	B	466	470	Right-handed 310
Helix 28	AD1	B	473	496	Right-handed alpha
Helix 29	AD2	B	503	507	Right-handed 310
Helix 30	AD3	D	10	15	Right-handed alpha
Helix 31	AD4	D	17	29	Right-handed alpha
Helix 32	AD5	D	35	47	Right-handed alpha
Helix 33	AD6	D	48	57	Right-handed alpha
Helix 34	AD7	D	69	79	Right-handed alpha
Helix 35	AD8	D	91	107	Right-handed alpha
Helix 36	AD9	D	120	125	Right-handed alpha
Helix 37	AE1	D	126	142	Right-handed alpha
Helix 38	AE2	D	151	158	Right-handed alpha
Helix 39	AE3	D	160	172	Right-handed alpha
Helix 40	AE4	D	191	209	Right-handed alpha
Helix 41	AE5	D	228	244	Right-handed alpha
Helix 42	AE6	D	273	280	Right-handed alpha
Helix 43	AE7	D	290	293	Right-handed 310
Helix 44	AE8	D	294	304	Right-handed alpha
Helix 45	AE9	D	315	332	Right-handed alpha
Helix 46	AF1	D	336	358	Right-handed alpha
Helix 47	AF2	D	367	382	Right-handed alpha
Helix 48	AF3	D	394	407	Right-handed alpha
Helix 49	AF4	D	408	412	Right-handed 310
Helix 50	AF5	D	421	432	Right-handed alpha
Helix 51	AF6	D	440	442	Right-handed 310
Helix 52	AF7	D	443	451	Right-handed alpha
Helix 53	AF8	D	466	470	Right-handed 310
Helix 54	AF9	D	473	496	Right-handed alpha
Helix 55	AG1	D	503	507	Right-handed 310
Helix 56	AG2	A	10	23	Right-handed alpha
Helix 57	AG3	A	26	34	Right-handed alpha
Helix 58	AG4	A	78	85	Right-handed alpha
Helix 59	AG5	A	102	108	Right-handed alpha
Helix 60	AG6	A	135	141	Right-handed alpha
Helix 61	AG7	A	143	158	Right-handed alpha
Helix 62	AG8	A	169	176	Right-handed alpha
Helix 63	AG9	A	178	191	Right-handed alpha
Helix 64	AH1	A	207	222	Right-handed alpha
Helix 65	AH2	A	249	262	Right-handed alpha
Helix 66	AH3	A	274	280	Right-handed alpha
Helix 67	AH4	A	281	284	Right-handed 310
Helix 68	AH5	A	291	307	Right-handed alpha
Helix 69	AH6	A	316	330	Right-handed alpha
Helix 70	AH7	A	333	363	Right-handed alpha
Helix 71	AH8	A	374	379	Right-handed alpha
Helix 72	AH9	A	379	386	Right-handed alpha
Helix 73	AI1	A	399	407	Right-handed alpha
Helix 74	AI2	A	421	433	Right-handed alpha
Helix 75	AI3	A	440	442	Right-handed 310
Helix 76	AI4	A	443	449	Right-handed alpha
Helix 77	AI5	A	459	463	Right-handed 310
Helix 78	AI6	A	467	484	Right-handed alpha
Helix 79	AI7	A	485	491	Right-handed 310
Helix 80	AI8	C	9	24	Right-handed alpha
Helix 81	AI9	C	26	35	Right-handed alpha
Helix 82	AJ1	C	78	85	Right-handed alpha
Helix 83	AJ2	C	102	108	Right-handed alpha
Helix 84	AJ3	C	135	142	Right-handed alpha
Helix 85	AJ4	C	143	158	Right-handed alpha
Helix 86	AJ5	C	169	176	Right-handed alpha
Helix 87	AJ6	C	178	191	Right-handed alpha
Helix 88	AJ7	C	207	222	Right-handed alpha
Helix 89	AJ8	C	249	261	Right-handed alpha
Helix 90	AJ9	C	274	281	Right-handed alpha
Helix 91	AK1	C	282	284	Right-handed 310
Helix 92	AK2	C	291	307	Right-handed alpha
Helix 93	AK3	C	316	331	Right-handed alpha
Helix 94	AK4	C	333	363	Right-handed alpha
Helix 95	AK5	C	374	379	Right-handed alpha
Helix 96	AK6	C	379	385	Right-handed alpha
Helix 97	AK7	C	399	407	Right-handed alpha
Helix 98	AK8	C	421	433	Right-handed alpha
Helix 99	AK9	C	440	449	Right-handed alpha
Helix 100	AL1	C	459	463	Right-handed 310
Helix 101	AL2	C	467	484	Right-handed alpha
Helix 102	AL3	C	485	491	Right-handed 310

There are 13 sheets in PDB entry 10ZL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	62	63	first strand
Strand 2	A	130	131	anti-parallel
Strand 3	A	94	99	parallel
Strand 4	A	163	168	parallel
Strand 5	A	193	197	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	112	114	first strand
Strand 2	B	84	89	parallel
Strand 3	B	145	150	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	249	first strand
Strand 2	B	219	222	parallel
Strand 3	B	285	288	parallel
Strand 4	B	307	310	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	415	418	first strand
Strand 2	B	384	390	parallel
Strand 3	B	361	365	parallel
Strand 4	B	436	439	parallel
Strand 5	B	454	456	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	63	first strand
Strand 2	C	130	131	anti-parallel
Strand 3	C	94	99	parallel
Strand 4	C	163	168	parallel
Strand 5	C	193	197	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	113	114	first strand
Strand 2	D	84	89	parallel
Strand 3	D	145	150	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	247	249	first strand
Strand 2	D	216	222	parallel
Strand 3	D	283	288	parallel
Strand 4	D	307	310	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	415	418	first strand
Strand 2	D	384	390	parallel
Strand 3	D	361	365	parallel
Strand 4	D	436	439	parallel
Strand 5	D	454	456	parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	37	39	first strand
Strand 2	A	415	417	anti-parallel
Strand 3	A	389	393	parallel
Strand 4	A	366	369	parallel
Strand 5	A	436	439	parallel
Strand 6	A	454	456	parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	264	270	first strand
Strand 2	A	238	244	parallel
Strand 3	A	286	289	parallel
Strand 4	A	310	312	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	415	417	anti-parallel
Strand 3	C	389	393	parallel
Strand 4	C	366	369	parallel
Strand 5	C	436	438	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	41	42	first strand
Strand 2	C	58	59	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	264	270	first strand
Strand 2	C	238	244	parallel
Strand 3	C	286	289	parallel
Strand 4	C	310	312	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 10ZL

Analysis of interatomic Contacts of Structural Units in PDB entry:
10ZL