Analysis of interatomic Contacts of Structural Units in PDB entry:
11AM


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11AM entry

There are 2 chains in PDB entry 11AM (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 48PRO 683
B
 GLU 48PRO 683
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 56 helices in PDB entry 11AM. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
49 85Right-handed alpha
Helix 2
AA2
A
88 113Right-handed alpha
Helix 3
AA3
A
122 130Right-handed alpha
Helix 4
AA4
A
135 141Right-handed 310
Helix 5
AA5
A
142 156Right-handed alpha
Helix 6
AA6
A
157 161Right-handed 310
Helix 7
AA7
A
165 188Right-handed alpha
Helix 8
AA8
A
193 214Right-handed alpha
Helix 9
AA9
A
215 228Right-handed alpha
Helix 10
AB1
A
233 257Right-handed alpha
Helix 11
AB2
A
280 313Right-handed alpha
Helix 12
AB3
A
313 323Right-handed alpha
Helix 13
AB4
A
323 338Right-handed alpha
Helix 14
AB5
A
353 362Right-handed alpha
Helix 15
AB6
A
366 374Right-handed alpha
Helix 16
AB7
A
383 392Right-handed 310
Helix 17
AB8
A
397 417Right-handed alpha
Helix 18
AB9
A
425 448Right-handed alpha
Helix 19
AC1
A
462 480Right-handed alpha
Helix 20
AC2
A
483 493Right-handed alpha
Helix 21
AC3
A
497 513Right-handed alpha
Helix 22
AC4
A
518 528Right-handed alpha
Helix 23
AC5
A
546 551Right-handed alpha
Helix 24
AC6
A
563 575Right-handed alpha
Helix 25
AC7
A
596 605Right-handed alpha
Helix 26
AC8
A
619 625Right-handed alpha
Helix 27
AC9
A
640 652Right-handed alpha
Helix 28
AD1
A
670 682Right-handed alpha
Helix 29
AD2
B
49 85Right-handed alpha
Helix 30
AD3
B
88 113Right-handed alpha
Helix 31
AD4
B
122 130Right-handed alpha
Helix 32
AD5
B
135 141Right-handed 310
Helix 33
AD6
B
142 156Right-handed alpha
Helix 34
AD7
B
157 161Right-handed 310
Helix 35
AD8
B
165 188Right-handed alpha
Helix 36
AD9
B
193 214Right-handed alpha
Helix 37
AE1
B
215 228Right-handed alpha
Helix 38
AE2
B
233 257Right-handed alpha
Helix 39
AE3
B
280 313Right-handed alpha
Helix 40
AE4
B
313 323Right-handed alpha
Helix 41
AE5
B
323 338Right-handed alpha
Helix 42
AE6
B
353 362Right-handed alpha
Helix 43
AE7
B
366 374Right-handed alpha
Helix 44
AE8
B
383 392Right-handed 310
Helix 45
AE9
B
397 417Right-handed alpha
Helix 46
AF1
B
425 448Right-handed alpha
Helix 47
AF2
B
462 480Right-handed alpha
Helix 48
AF3
B
483 493Right-handed alpha
Helix 49
AF4
B
497 513Right-handed alpha
Helix 50
AF5
B
518 528Right-handed alpha
Helix 51
AF6
B
546 551Right-handed alpha
Helix 52
AF7
B
563 575Right-handed alpha
Helix 53
AF8
B
596 605Right-handed alpha
Helix 54
AF9
B
619 625Right-handed alpha
Helix 55
AG1
B
640 652Right-handed alpha
Helix 56
AG2
B
670 682Right-handed alpha
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There are 6 sheets in PDB entry 11AM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
B
230 232anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
558 559first strand
Strand 2
A
578 582parallel
Strand 3
A
590 595anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
633 635first strand
Strand 2
B
633 635anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
655 660first strand
Strand 2
A
663 669anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
558 559first strand
Strand 2
B
578 582parallel
Strand 3
B
590 595anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
655 660first strand
Strand 2
B
663 669anti-parallel
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