Analysis of interatomic Contacts of Structural Units in PDB entry:
11BB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11BB entry

There are 22 chains in PDB entry 11BB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	ASP 263
B	MET 1	ASP 263
C	MET 1	ASP 263
D	MET 1	ASP 263
E	MET 1	ASP 263
F	MET 1	ASP 263
G	MET 1	ASP 263
H	MET 1	ASP 263
I	MET 1	ASP 263
J	MET 1	ASP 263
L	PRO 48	ILE 130
M	PRO 48	ILE 130
N	PRO 48	ILE 130
O	PRO 48	ILE 130
P	PRO 48	ILE 130
Q	PRO 48	ILE 130
R	PRO 48	ILE 130
K	MET 1	ASP 263
S	PRO 48	ILE 130
T	PRO 48	ILE 130
U	PRO 48	ILE 130
V	PRO 48	ILE 130

There are 99 helices in PDB entry 11BB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	42	Right-handed alpha
Helix 2	AA2	A	79	81	Right-handed 310
Helix 3	AA3	A	102	107	Right-handed alpha
Helix 4	AA4	A	138	149	Right-handed alpha
Helix 5	AA5	A	149	155	Right-handed alpha
Helix 6	AA6	A	206	215	Right-handed alpha
Helix 7	AA7	A	215	263	Right-handed alpha
Helix 8	AA8	B	2	42	Right-handed alpha
Helix 9	AA9	B	79	81	Right-handed 310
Helix 10	AB1	B	102	107	Right-handed alpha
Helix 11	AB2	B	138	149	Right-handed alpha
Helix 12	AB3	B	149	155	Right-handed alpha
Helix 13	AB4	B	206	215	Right-handed alpha
Helix 14	AB5	B	215	263	Right-handed alpha
Helix 15	AB6	C	2	42	Right-handed alpha
Helix 16	AB7	C	79	81	Right-handed 310
Helix 17	AB8	C	102	107	Right-handed alpha
Helix 18	AB9	C	138	149	Right-handed alpha
Helix 19	AC1	C	149	155	Right-handed alpha
Helix 20	AC2	C	206	215	Right-handed alpha
Helix 21	AC3	C	215	263	Right-handed alpha
Helix 22	AC4	D	2	42	Right-handed alpha
Helix 23	AC5	D	79	81	Right-handed 310
Helix 24	AC6	D	102	107	Right-handed alpha
Helix 25	AC7	D	138	149	Right-handed alpha
Helix 26	AC8	D	149	155	Right-handed alpha
Helix 27	AC9	D	206	215	Right-handed alpha
Helix 28	AD1	D	215	263	Right-handed alpha
Helix 29	AD2	E	2	42	Right-handed alpha
Helix 30	AD3	E	79	81	Right-handed 310
Helix 31	AD4	E	102	107	Right-handed alpha
Helix 32	AD5	E	138	149	Right-handed alpha
Helix 33	AD6	E	149	155	Right-handed alpha
Helix 34	AD7	E	206	215	Right-handed alpha
Helix 35	AD8	E	215	263	Right-handed alpha
Helix 36	AD9	F	2	42	Right-handed alpha
Helix 37	AE1	F	79	81	Right-handed 310
Helix 38	AE2	F	102	107	Right-handed alpha
Helix 39	AE3	F	138	149	Right-handed alpha
Helix 40	AE4	F	149	155	Right-handed alpha
Helix 41	AE5	F	206	215	Right-handed alpha
Helix 42	AE6	F	215	263	Right-handed alpha
Helix 43	AE7	G	2	42	Right-handed alpha
Helix 44	AE8	G	79	81	Right-handed 310
Helix 45	AE9	G	102	107	Right-handed alpha
Helix 46	AF1	G	138	149	Right-handed alpha
Helix 47	AF2	G	149	155	Right-handed alpha
Helix 48	AF3	G	206	215	Right-handed alpha
Helix 49	AF4	G	215	263	Right-handed alpha
Helix 50	AF5	H	2	42	Right-handed alpha
Helix 51	AF6	H	79	81	Right-handed 310
Helix 52	AF7	H	102	107	Right-handed alpha
Helix 53	AF8	H	138	149	Right-handed alpha
Helix 54	AF9	H	149	155	Right-handed alpha
Helix 55	AG1	H	206	215	Right-handed alpha
Helix 56	AG2	H	215	263	Right-handed alpha
Helix 57	AG3	I	2	42	Right-handed alpha
Helix 58	AG4	I	79	81	Right-handed 310
Helix 59	AG5	I	102	107	Right-handed alpha
Helix 60	AG6	I	138	149	Right-handed alpha
Helix 61	AG7	I	149	155	Right-handed alpha
Helix 62	AG8	I	206	215	Right-handed alpha
Helix 63	AG9	I	215	263	Right-handed alpha
Helix 64	AH1	J	2	42	Right-handed alpha
Helix 65	AH2	J	79	81	Right-handed 310
Helix 66	AH3	J	102	107	Right-handed alpha
Helix 67	AH4	J	138	149	Right-handed alpha
Helix 68	AH5	J	149	155	Right-handed alpha
Helix 69	AH6	J	206	215	Right-handed alpha
Helix 70	AH7	J	215	263	Right-handed alpha
Helix 71	AH8	L	49	75	Right-handed alpha
Helix 72	AH9	L	85	130	Right-handed alpha
Helix 73	AI1	M	49	75	Right-handed alpha
Helix 74	AI2	M	85	130	Right-handed alpha
Helix 75	AI3	N	49	75	Right-handed alpha
Helix 76	AI4	N	85	130	Right-handed alpha
Helix 77	AI5	O	49	75	Right-handed alpha
Helix 78	AI6	O	85	130	Right-handed alpha
Helix 79	AI7	P	49	75	Right-handed alpha
Helix 80	AI8	P	85	130	Right-handed alpha
Helix 81	AI9	Q	49	75	Right-handed alpha
Helix 82	AJ1	Q	85	130	Right-handed alpha
Helix 83	AJ2	R	49	75	Right-handed alpha
Helix 84	AJ3	R	85	130	Right-handed alpha
Helix 85	AJ4	K	2	42	Right-handed alpha
Helix 86	AJ5	K	79	81	Right-handed 310
Helix 87	AJ6	K	102	107	Right-handed alpha
Helix 88	AJ7	K	138	149	Right-handed alpha
Helix 89	AJ8	K	149	155	Right-handed alpha
Helix 90	AJ9	K	206	215	Right-handed alpha
Helix 91	AK1	K	215	263	Right-handed alpha
Helix 92	AK2	S	49	75	Right-handed alpha
Helix 93	AK3	S	85	130	Right-handed alpha
Helix 94	AK4	T	49	75	Right-handed alpha
Helix 95	AK5	T	85	130	Right-handed alpha
Helix 96	AK6	U	49	75	Right-handed alpha
Helix 97	AK7	U	85	130	Right-handed alpha
Helix 98	AK8	V	49	75	Right-handed alpha
Helix 99	AK9	V	85	130	Right-handed alpha

There are 33 sheets in PDB entry 11BB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	51	first strand
Strand 2	A	196	203	anti-parallel
Strand 3	A	91	100	anti-parallel
Strand 4	A	161	172	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	71	75	first strand
Strand 2	A	182	187	anti-parallel
Strand 3	A	111	118	anti-parallel
Strand 4	A	124	132	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	77	78	first strand
Strand 2	A	82	83	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	46	51	first strand
Strand 2	B	196	203	anti-parallel
Strand 3	B	91	100	anti-parallel
Strand 4	B	161	172	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	71	75	first strand
Strand 2	B	182	187	anti-parallel
Strand 3	B	111	118	anti-parallel
Strand 4	B	124	132	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	77	78	first strand
Strand 2	B	82	83	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	46	51	first strand
Strand 2	C	196	203	anti-parallel
Strand 3	C	91	100	anti-parallel
Strand 4	C	161	172	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	71	75	first strand
Strand 2	C	182	187	anti-parallel
Strand 3	C	111	118	anti-parallel
Strand 4	C	124	132	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	77	78	first strand
Strand 2	C	82	83	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	46	51	first strand
Strand 2	D	196	203	anti-parallel
Strand 3	D	91	100	anti-parallel
Strand 4	D	161	172	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	71	75	first strand
Strand 2	D	182	187	anti-parallel
Strand 3	D	111	118	anti-parallel
Strand 4	D	124	132	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	77	78	first strand
Strand 2	D	82	83	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	46	51	first strand
Strand 2	E	196	203	anti-parallel
Strand 3	E	91	100	anti-parallel
Strand 4	E	161	172	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	71	75	first strand
Strand 2	E	182	187	anti-parallel
Strand 3	E	111	118	anti-parallel
Strand 4	E	124	132	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	77	78	first strand
Strand 2	E	82	83	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	46	51	first strand
Strand 2	F	196	203	anti-parallel
Strand 3	F	91	100	anti-parallel
Strand 4	F	161	172	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	71	75	first strand
Strand 2	F	182	187	anti-parallel
Strand 3	F	111	118	anti-parallel
Strand 4	F	124	132	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	77	78	first strand
Strand 2	F	82	83	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	46	51	first strand
Strand 2	G	196	203	anti-parallel
Strand 3	G	91	100	anti-parallel
Strand 4	G	161	172	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	71	75	first strand
Strand 2	G	182	187	anti-parallel
Strand 3	G	111	118	anti-parallel
Strand 4	G	124	132	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	77	78	first strand
Strand 2	G	82	83	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	46	51	first strand
Strand 2	H	196	203	anti-parallel
Strand 3	H	91	100	anti-parallel
Strand 4	H	161	172	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	71	75	first strand
Strand 2	H	182	187	anti-parallel
Strand 3	H	111	118	anti-parallel
Strand 4	H	124	132	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	77	78	first strand
Strand 2	H	82	83	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	46	51	first strand
Strand 2	I	196	203	anti-parallel
Strand 3	I	91	100	anti-parallel
Strand 4	I	161	172	anti-parallel

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There are 4 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	71	75	first strand
Strand 2	I	182	187	anti-parallel
Strand 3	I	111	118	anti-parallel
Strand 4	I	124	132	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	77	78	first strand
Strand 2	I	82	83	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	46	51	first strand
Strand 2	J	196	203	anti-parallel
Strand 3	J	91	100	anti-parallel
Strand 4	J	161	172	anti-parallel

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There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	71	75	first strand
Strand 2	J	182	187	anti-parallel
Strand 3	J	111	118	anti-parallel
Strand 4	J	124	132	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	77	78	first strand
Strand 2	J	82	83	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	46	51	first strand
Strand 2	K	196	203	anti-parallel
Strand 3	K	91	100	anti-parallel
Strand 4	K	161	172	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	71	75	first strand
Strand 2	K	182	187	anti-parallel
Strand 3	K	111	118	anti-parallel
Strand 4	K	124	132	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	77	78	first strand
Strand 2	K	82	83	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11BB

Analysis of interatomic Contacts of Structural Units in PDB entry:
11BB