Analysis of interatomic Contacts of Structural Units in PDB entry:
11GP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11GP entry

There is 1 chain in PDB entry 11GP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1008HIS 3500
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are129 helices in PDB entry 11GP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1029 1034Right-handed alpha
Helix 2
AA2
A
1050 1059Right-handed alpha
Helix 3
AA3
A
1061 1069Right-handed alpha
Helix 4
AA4
A
1079 1110Right-handed alpha
Helix 5
AA5
A
1111 1113Right-handed 310
Helix 6
AA6
A
1114 1120Right-handed alpha
Helix 7
AA7
A
1122 1126Right-handed 310
Helix 8
AA8
A
1129 1134Right-handed 310
Helix 9
AA9
A
1145 1161Right-handed alpha
Helix 10
AB1
A
1162 1167Right-handed alpha
Helix 11
AB2
A
1171 1180Right-handed alpha
Helix 12
AB3
A
1182 1186Right-handed 310
Helix 13
AB4
A
1187 1196Right-handed alpha
Helix 14
AB5
A
1199 1216Right-handed alpha
Helix 15
AB6
A
1224 1229Right-handed alpha
Helix 16
AB7
A
1229 1246Right-handed alpha
Helix 17
AB8
A
1257 1259Right-handed 310
Helix 18
AB9
A
1279 1284Right-handed 310
Helix 19
AC1
A
1286 1293Right-handed alpha
Helix 20
AC2
A
1322 1333Right-handed alpha
Helix 21
AC3
A
1340 1351Right-handed alpha
Helix 22
AC4
A
1351 1360Right-handed alpha
Helix 23
AC5
A
1370 1402Right-handed alpha
Helix 24
AC6
A
1433 1439Right-handed alpha
Helix 25
AC7
A
1454 1468Right-handed alpha
Helix 26
AC8
A
1471 1475Right-handed 310
Helix 27
AC9
A
1476 1490Right-handed alpha
Helix 28
AD1
A
1492 1506Right-handed alpha
Helix 29
AD2
A
1511 1521Right-handed alpha
Helix 30
AD3
A
1522 1524Right-handed 310
Helix 31
AD4
A
1525 1539Right-handed alpha
Helix 32
AD5
A
1559 1570Right-handed alpha
Helix 33
AD6
A
1575 1583Right-handed alpha
Helix 34
AD7
A
1595 1601Right-handed alpha
Helix 35
AD8
A
1607 1627Right-handed alpha
Helix 36
AD9
A
1630 1648Right-handed alpha
Helix 37
AE1
A
1668 1675Right-handed alpha
Helix 38
AE2
A
1678 1706Right-handed alpha
Helix 39
AE3
A
1712 1719Right-handed alpha
Helix 40
AE4
A
1720 1722Right-handed 310
Helix 41
AE5
A
1724 1744Right-handed alpha
Helix 42
AE6
A
1768 1772Right-handed 310
Helix 43
AE7
A
1775 1803Right-handed alpha
Helix 44
AE8
A
1803 1841Right-handed alpha
Helix 45
AE9
A
1852 1862Right-handed alpha
Helix 46
AF1
A
1863 1867Right-handed 310
Helix 47
AF2
A
1896 1899Right-handed 310
Helix 48
AF3
A
1912 1914Right-handed 310
Helix 49
AF4
A
1915 1925Right-handed alpha
Helix 50
AF5
A
1925 1934Right-handed alpha
Helix 51
AF6
A
1956 1972Right-handed alpha
Helix 52
AF7
A
1975 1991Right-handed alpha
Helix 53
AF8
A
1992 1996Right-handed 310
Helix 54
AF9
A
1997 2006Right-handed alpha
Helix 55
AG1
A
2010 2015Right-handed alpha
Helix 56
AG2
A
2018 2048Right-handed alpha
Helix 57
AG3
A
2076 2100Right-handed alpha
Helix 58
AG4
A
2144 2148Right-handed 310
Helix 59
AG5
A
2151 2167Right-handed alpha
Helix 60
AG6
A
2176 2187Right-handed alpha
Helix 61
AG7
A
2198 2203Right-handed 310
Helix 62
AG8
A
2222 2244Right-handed alpha
Helix 63
AG9
A
2249 2267Right-handed alpha
Helix 64
AH1
A
2275 2294Right-handed alpha
Helix 65
AH2
A
2299 2317Right-handed alpha
Helix 66
AH3
A
2318 2326Right-handed alpha
Helix 67
AH4
A
2329 2347Right-handed alpha
Helix 68
AH5
A
2376 2384Right-handed alpha
Helix 69
AH6
A
2395 2406Right-handed alpha
Helix 70
AH7
A
2408 2412Right-handed 310
Helix 71
AH8
A
2429 2442Right-handed alpha
Helix 72
AH9
A
2449 2470Right-handed alpha
Helix 73
AI1
A
2471 2473Right-handed 310
Helix 74
AI2
A
2474 2488Right-handed alpha
Helix 75
AI3
A
2489 2493Right-handed 310
Helix 76
AI4
A
2501 2517Right-handed alpha
Helix 77
AI5
A
2530 2542Right-handed alpha
Helix 78
AI6
A
2542 2550Right-handed alpha
Helix 79
AI7
A
2555 2559Right-handed 310
Helix 80
AI8
A
2568 2585Right-handed alpha
Helix 81
AI9
A
2592 2616Right-handed alpha
Helix 82
AJ1
A
2617 2619Right-handed 310
Helix 83
AJ2
A
2624 2642Right-handed alpha
Helix 84
AJ3
A
2657 2659Right-handed 310
Helix 85
AJ4
A
2660 2665Right-handed alpha
Helix 86
AJ5
A
2665 2675Right-handed alpha
Helix 87
AJ6
A
2680 2684Right-handed 310
Helix 88
AJ7
A
2685 2694Right-handed alpha
Helix 89
AJ8
A
2695 2708Right-handed alpha
Helix 90
AJ9
A
2716 2736Right-handed alpha
Helix 91
AK1
A
2736 2745Right-handed alpha
Helix 92
AK2
A
2751 2763Right-handed alpha
Helix 93
AK3
A
2766 2773Right-handed 310
Helix 94
AK4
A
2778 2783Right-handed alpha
Helix 95
AK5
A
2787 2805Right-handed alpha
Helix 96
AK6
A
2807 2825Right-handed alpha
Helix 97
AK7
A
2836 2842Right-handed alpha
Helix 98
AK8
A
2856 2868Right-handed alpha
Helix 99
AK9
A
2873 2884Right-handed alpha
Helix 100
AL1
A
2884 2907Right-handed alpha
Helix 101
AL2
A
2909 2914Right-handed alpha
Helix 102
AL3
A
2936 2943Right-handed alpha
Helix 103
AL4
A
3010 3022Right-handed alpha
Helix 104
AL5
A
3049 3057Right-handed 310
Helix 105
AL6
A
3063 3099Right-handed alpha
Helix 106
AL7
A
3101 3106Right-handed 310
Helix 107
AL8
A
3117 3124Right-handed alpha
Helix 108
AL9
A
3125 3127Right-handed 310
Helix 109
AM1
A
3128 3140Right-handed alpha
Helix 110
AM2
A
3148 3155Right-handed alpha
Helix 111
AM3
A
3156 3158Right-handed 310
Helix 112
AM4
A
3173 3188Right-handed alpha
Helix 113
AM5
A
3189 3197Right-handed alpha
Helix 114
AM6
A
3202 3207Right-handed alpha
Helix 115
AM7
A
3210 3237Right-handed alpha
Helix 116
AM8
A
3239 3271Right-handed alpha
Helix 117
AM9
A
3272 3274Right-handed 310
Helix 118
AN1
A
3277 3297Right-handed alpha
Helix 119
AN2
A
3300 3306Right-handed alpha
Helix 120
AN3
A
3321 3329Right-handed alpha
Helix 121
AN4
A
3330 3340Right-handed alpha
Helix 122
AN5
A
3357 3382Right-handed alpha
Helix 123
AN6
A
3389 3400Right-handed alpha
Helix 124
AN7
A
3403 3407Right-handed 310
Helix 125
AN8
A
3417 3441Right-handed alpha
Helix 126
AN9
A
3441 3448Right-handed alpha
Helix 127
AO1
A
3467 3474Right-handed alpha
Helix 128
AO2
A
3484 3488Right-handed 310
Helix 129
AO3
A
3493 3500Right-handed alpha
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There are 16 sheets in PDB entry 11GP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1035 1036first strand
Strand 2
A
1218 1219anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1136 1138first strand
Strand 2
A
1141 1143anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1249 1255first strand
Strand 2
A
1266 1272anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1301 1302first strand
Strand 2
A
1410 1411anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1338 1339first strand
Strand 2
A
1440 1441anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1414 1416first strand
Strand 2
A
1422 1424anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1552 1554first strand
Strand 2
A
1951 1953anti-parallel
Strand 3
A
1943 1944anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1587 1589first strand
Strand 2
A
2052 2054anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1745 1750first strand
Strand 2
A
1753 1758anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1870 1871first strand
Strand 2
A
1876 1877anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1881 1885first strand
Strand 2
A
1905 1909anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1891 1894first strand
Strand 2
A
1901 1903anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2126 2127first strand
Strand 2
A
2134 2136anti-parallel
Strand 3
A
2171 2175anti-parallel
Strand 4
A
2215 2219parallel
Strand 5
A
2209 2210anti-parallel
Strand 6
A
2369 2370parallel
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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2930 2935first strand
Strand 2
A
2964 2969anti-parallel
Strand 3
A
2948 2952anti-parallel
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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3007 3008first strand
Strand 2
A
3041 3046anti-parallel
Strand 3
A
3031 3035anti-parallel
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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3108 3110first strand
Strand 2
A
3145 3147anti-parallel
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