Analysis of interatomic Contacts of Structural Units in PDB entry:
11HB

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11HB entry

There are 9 chains in PDB entry 11HB (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 224	MET 530
L	ILE 2	ARG 222
H	VAL 2	ASP 210
B	THR 224	MET 530
C	ILE 2	ASN 221
D	VAL 2	ASP 210
E	THR 224	MET 530
K	ILE 2	LYS 218
G	VAL 2	SER 206

There are 15 helices in PDB entry 11HB. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	233	237	Right-handed 310
Helix 2	AA2	A	454	465	Right-handed alpha
Helix 3	AA3	L	132	139	Right-handed alpha
Helix 4	AA4	L	194	199	Right-handed alpha
Helix 5	AA5	H	87	91	Right-handed 310
Helix 6	AA6	B	454	465	Right-handed alpha
Helix 7	AA7	C	132	139	Right-handed alpha
Helix 8	AA8	C	193	199	Right-handed alpha
Helix 9	AA9	D	87	91	Right-handed 310
Helix 10	AB1	D	162	167	Right-handed 310
Helix 11	AB2	E	279	283	Right-handed 310
Helix 12	AB3	E	305	309	Right-handed 310
Helix 13	AB4	E	454	465	Right-handed alpha
Helix 14	AB5	K	79	83	Right-handed 310
Helix 15	AB6	G	87	91	Right-handed 310

There are 41 sheets in PDB entry 11HB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	451	first strand
Strand 2	A	429	437	anti-parallel
Strand 3	A	248	252	anti-parallel
Strand 4	A	505	507	anti-parallel

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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	448	451	first strand
Strand 2	A	429	437	anti-parallel
Strand 3	A	497	500	anti-parallel
Strand 4	A	484	492	anti-parallel
Strand 5	A	472	479	anti-parallel
Strand 6	A	514	521	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	265	266	first strand
Strand 2	A	272	273	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	353	first strand
Strand 2	A	328	337	anti-parallel
Strand 3	A	380	389	anti-parallel
Strand 4	A	286	292	anti-parallel
Strand 5	A	298	303	anti-parallel
Strand 6	A	364	368	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	344	353	first strand
Strand 2	A	328	337	anti-parallel
Strand 3	A	380	389	anti-parallel
Strand 4	A	440	442	parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	4	5	first strand
Strand 2	L	21	25	anti-parallel
Strand 3	L	70	73	anti-parallel
Strand 4	L	65	67	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	10	12	first strand
Strand 2	L	102	104	parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	53	54	first strand
Strand 2	L	44	49	anti-parallel
Strand 3	L	35	38	anti-parallel
Strand 4	L	85	88	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	125	129	first strand
Strand 2	L	140	150	anti-parallel
Strand 3	L	184	193	anti-parallel
Strand 4	L	170	175	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	156	159	first strand
Strand 2	L	202	208	anti-parallel
Strand 3	L	216	221	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	3	7	first strand
Strand 2	H	17	25	anti-parallel
Strand 3	H	78	84	anti-parallel
Strand 4	H	68	73	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	110	114	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	34	40	anti-parallel
Strand 5	H	46	52	anti-parallel
Strand 6	H	58	60	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	11	12	first strand
Strand 2	H	110	114	parallel
Strand 3	H	92	99	anti-parallel
Strand 4	H	103	105	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	123	126	first strand
Strand 2	H	139	148	anti-parallel
Strand 3	H	177	186	anti-parallel
Strand 4	H	166	168	anti-parallel

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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	123	126	first strand
Strand 2	H	139	148	anti-parallel
Strand 3	H	177	186	anti-parallel
Strand 4	H	172	174	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	154	157	first strand
Strand 2	H	198	201	anti-parallel
Strand 3	H	207	209	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	449	first strand
Strand 2	B	429	437	anti-parallel
Strand 3	B	248	252	anti-parallel
Strand 4	B	505	507	anti-parallel

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There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	448	449	first strand
Strand 2	B	429	437	anti-parallel
Strand 3	B	496	500	anti-parallel
Strand 4	B	484	492	anti-parallel
Strand 5	B	472	479	anti-parallel
Strand 6	B	514	521	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	265	266	first strand
Strand 2	B	272	273	anti-parallel

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There are 7 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	286	292	first strand
Strand 2	B	298	303	anti-parallel
Strand 3	B	364	369	anti-parallel
Strand 4	B	344	352	anti-parallel
Strand 5	B	329	337	anti-parallel
Strand 6	B	380	388	anti-parallel
Strand 7	B	286	292	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	4	5	first strand
Strand 2	C	18	25	anti-parallel
Strand 3	C	70	76	anti-parallel
Strand 4	C	62	67	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	10	11	first strand
Strand 2	C	100	103	parallel
Strand 3	C	85	87	anti-parallel
Strand 4	C	34	38	anti-parallel
Strand 5	C	44	49	anti-parallel
Strand 6	C	53	54	anti-parallel

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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	129	first strand
Strand 2	C	143	150	anti-parallel
Strand 3	C	184	190	anti-parallel
Strand 4	C	170	174	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	157	161	first strand
Strand 2	C	203	207	anti-parallel
Strand 3	C	219	220	anti-parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	7	first strand
Strand 2	D	18	24	anti-parallel
Strand 3	D	78	83	anti-parallel
Strand 4	D	68	73	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	110	114	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	34	41	anti-parallel
Strand 5	D	45	51	anti-parallel
Strand 6	D	59	60	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	11	12	first strand
Strand 2	D	110	114	parallel
Strand 3	D	92	99	anti-parallel
Strand 4	D	103	105	anti-parallel

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There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	126	first strand
Strand 2	D	143	148	anti-parallel
Strand 3	D	178	181	anti-parallel
Strand 4	D	172	173	anti-parallel

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There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	154	156	first strand
Strand 2	D	198	201	anti-parallel
Strand 3	D	206	209	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	448	451	first strand
Strand 2	E	429	437	anti-parallel
Strand 3	E	248	251	anti-parallel
Strand 4	E	505	507	anti-parallel

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There are 6 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	448	451	first strand
Strand 2	E	429	437	anti-parallel
Strand 3	E	497	500	anti-parallel
Strand 4	E	484	492	anti-parallel
Strand 5	E	472	479	anti-parallel
Strand 6	E	514	521	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	265	266	first strand
Strand 2	E	272	273	anti-parallel

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There are 7 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	286	292	first strand
Strand 2	E	298	304	anti-parallel
Strand 3	E	364	369	anti-parallel
Strand 4	E	344	352	anti-parallel
Strand 5	E	329	337	anti-parallel
Strand 6	E	380	388	anti-parallel
Strand 7	E	286	292	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	4	5	first strand
Strand 2	K	19	29	anti-parallel
Strand 3	K	68	75	anti-parallel
Strand 4	K	62	65	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	10	13	first strand
Strand 2	K	102	105	parallel

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There are 4 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	53	54	first strand
Strand 2	K	44	49	anti-parallel
Strand 3	K	33	38	anti-parallel
Strand 4	K	85	90	anti-parallel

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There are 3 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	146	150	first strand
Strand 2	K	184	187	anti-parallel
Strand 3	K	173	174	anti-parallel

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There are 4 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	3	7	first strand
Strand 2	G	20	25	anti-parallel
Strand 3	G	78	83	anti-parallel
Strand 4	G	68	73	anti-parallel

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There are 6 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	110	114	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	35	41	anti-parallel
Strand 5	G	45	52	anti-parallel
Strand 6	G	58	60	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	11	12	first strand
Strand 2	G	110	114	parallel
Strand 3	G	92	99	anti-parallel
Strand 4	G	103	105	anti-parallel

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There are 4 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	123	124	first strand
Strand 2	G	144	146	anti-parallel
Strand 3	G	178	181	anti-parallel
Strand 4	G	172	173	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11HB

Analysis of interatomic Contacts of Structural Units in PDB entry:
11HB