Analysis of interatomic Contacts of Structural Units in PDB entry:
11HL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11HL entry

There are 3 chains in PDB entry 11HL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 971ASN 1777
B
 GLY 987ASN 1777
C
 GLY 987ASN 1777
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 11HL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
971 1032Right-handed alpha
Helix 2
AA2
A
1737 1743Right-handed alpha
Helix 3
AA3
A
1746 1754Right-handed alpha
Helix 4
AA4
A
1755 1757Right-handed 310
Helix 5
AA5
A
1758 1768Right-handed alpha
Helix 6
AA6
B
988 1048Right-handed alpha
Helix 7
AA7
B
1737 1743Right-handed alpha
Helix 8
AA8
B
1746 1754Right-handed alpha
Helix 9
AA9
B
1755 1757Right-handed 310
Helix 10
AB1
B
1758 1768Right-handed alpha
Helix 11
AB2
C
988 1048Right-handed alpha
Helix 12
AB3
C
1737 1743Right-handed alpha
Helix 13
AB4
C
1746 1754Right-handed alpha
Helix 14
AB5
C
1755 1757Right-handed 310
Helix 15
AB6
C
1758 1768Right-handed alpha
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There are 9 sheets in PDB entry 11HL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1047 1056first strand
Strand 2
A
1059 1078anti-parallel
Strand 3
A
1094 1097anti-parallel
Strand 4
A
1102 1105anti-parallel
Strand 5
A
1113 1114anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1047 1056first strand
Strand 2
A
1059 1078anti-parallel
Strand 3
A
1710 1728anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1088 1090first strand
Strand 2
A
1120 1122anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1063 1072first strand
Strand 2
B
1075 1094anti-parallel
Strand 3
B
1110 1113anti-parallel
Strand 4
B
1118 1121anti-parallel
Strand 5
B
1129 1130anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1063 1072first strand
Strand 2
B
1075 1094anti-parallel
Strand 3
B
1710 1728anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1104 1106first strand
Strand 2
B
1136 1138anti-parallel
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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1063 1072first strand
Strand 2
C
1075 1094anti-parallel
Strand 3
C
1110 1113anti-parallel
Strand 4
C
1118 1121anti-parallel
Strand 5
C
1129 1130anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1063 1072first strand
Strand 2
C
1075 1094anti-parallel
Strand 3
C
1710 1728anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
1104 1106first strand
Strand 2
C
1136 1138anti-parallel
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