Analysis of interatomic Contacts of Structural Units in PDB entry:
11HN

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11HN entry

There are 3 chains in PDB entry 11HN (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLY 987	LYS 1776
C	GLY 987	LYS 1776
A	GLY 987	LYS 1776

There are 21 helices in PDB entry 11HN. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	987	1048	Right-handed alpha
Helix 2	AA2	B	1098	1102	Right-handed 310
Helix 3	AA3	B	1704	1708	Right-handed 310
Helix 4	AA4	B	1737	1743	Right-handed alpha
Helix 5	AA5	B	1746	1754	Right-handed alpha
Helix 6	AA6	B	1755	1757	Right-handed 310
Helix 7	AA7	B	1758	1768	Right-handed alpha
Helix 8	AA8	C	988	1048	Right-handed alpha
Helix 9	AA9	C	1098	1102	Right-handed 310
Helix 10	AB1	C	1704	1708	Right-handed 310
Helix 11	AB2	C	1737	1743	Right-handed alpha
Helix 12	AB3	C	1746	1754	Right-handed alpha
Helix 13	AB4	C	1755	1757	Right-handed 310
Helix 14	AB5	C	1758	1768	Right-handed alpha
Helix 15	AB6	A	988	1048	Right-handed alpha
Helix 16	AB7	A	1098	1102	Right-handed 310
Helix 17	AB8	A	1704	1708	Right-handed 310
Helix 18	AB9	A	1737	1743	Right-handed alpha
Helix 19	AC1	A	1746	1754	Right-handed alpha
Helix 20	AC2	A	1755	1757	Right-handed 310
Helix 21	AC3	A	1758	1768	Right-handed alpha

There are 9 sheets in PDB entry 11HN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1063	1072	first strand
Strand 2	B	1075	1094	anti-parallel
Strand 3	B	1110	1113	anti-parallel
Strand 4	B	1118	1121	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1063	1072	first strand
Strand 2	B	1075	1094	anti-parallel
Strand 3	B	1710	1728	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1104	1106	first strand
Strand 2	B	1136	1138	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1063	1072	first strand
Strand 2	C	1075	1094	anti-parallel
Strand 3	C	1110	1113	anti-parallel
Strand 4	C	1118	1121	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1063	1072	first strand
Strand 2	C	1075	1094	anti-parallel
Strand 3	C	1710	1728	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1104	1106	first strand
Strand 2	C	1136	1138	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1063	1072	first strand
Strand 2	A	1075	1094	anti-parallel
Strand 3	A	1110	1113	anti-parallel
Strand 4	A	1118	1121	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1063	1072	first strand
Strand 2	A	1075	1094	anti-parallel
Strand 3	A	1710	1728	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1104	1106	first strand
Strand 2	A	1136	1138	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11HN

Analysis of interatomic Contacts of Structural Units in PDB entry:
11HN