Analysis of interatomic Contacts of Structural Units in PDB entry:
11HZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11HZ entry

There are 4 chains in PDB entry 11HZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
PHE 74GLY 729
D
PHE 74GLY 729
B
PHE 74GLY 729
C
PHE 74GLY 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are120 helices in PDB entry 11HZ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
75 86Right-handed alpha
Helix 2
AA2
A
93 102Right-handed alpha
Helix 3
AA3
A
118 126Right-handed alpha
Helix 4
AA4
A
134 144Right-handed alpha
Helix 5
AA5
A
165 173Right-handed alpha
Helix 6
AA6
A
175 185Right-handed alpha
Helix 7
AA7
A
195 199Right-handed 310
Helix 8
AA8
A
211 218Right-handed alpha
Helix 9
AA9
A
221 230Right-handed alpha
Helix 10
AB1
A
247 255Right-handed alpha
Helix 11
AB2
A
259 281Right-handed alpha
Helix 12
AB3
A
285 289Right-handed 310
Helix 13
AB4
A
296 304Right-handed alpha
Helix 14
AB5
A
306 315Right-handed alpha
Helix 15
AB6
A
353 360Right-handed alpha
Helix 16
AB7
A
367 371Right-handed 310
Helix 17
AB8
A
375 386Right-handed alpha
Helix 18
AB9
A
387 411Right-handed alpha
Helix 19
AC1
A
432 457Right-handed alpha
Helix 20
AC2
A
462 467Right-handed alpha
Helix 21
AC3
A
469 490Right-handed alpha
Helix 22
AC4
A
494 509Right-handed alpha
Helix 23
AC5
A
510 516Right-handed 310
Helix 24
AC6
A
517 532Right-handed alpha
Helix 25
AC7
A
534 557Right-handed alpha
Helix 26
AC8
A
592 606Right-handed alpha
Helix 27
AC9
A
618 634Right-handed alpha
Helix 28
AD1
A
637 652Right-handed alpha
Helix 29
AD2
A
652 673Right-handed alpha
Helix 30
AD3
A
724 729Right-handed alpha
Helix 31
AD4
D
75 86Right-handed alpha
Helix 32
AD5
D
93 102Right-handed alpha
Helix 33
AD6
D
118 126Right-handed alpha
Helix 34
AD7
D
134 144Right-handed alpha
Helix 35
AD8
D
165 173Right-handed alpha
Helix 36
AD9
D
175 185Right-handed alpha
Helix 37
AE1
D
195 199Right-handed 310
Helix 38
AE2
D
211 218Right-handed alpha
Helix 39
AE3
D
221 230Right-handed alpha
Helix 40
AE4
D
247 255Right-handed alpha
Helix 41
AE5
D
259 281Right-handed alpha
Helix 42
AE6
D
285 289Right-handed 310
Helix 43
AE7
D
296 304Right-handed alpha
Helix 44
AE8
D
306 315Right-handed alpha
Helix 45
AE9
D
353 360Right-handed alpha
Helix 46
AF1
D
367 371Right-handed 310
Helix 47
AF2
D
375 386Right-handed alpha
Helix 48
AF3
D
387 411Right-handed alpha
Helix 49
AF4
D
432 457Right-handed alpha
Helix 50
AF5
D
462 467Right-handed alpha
Helix 51
AF6
D
469 490Right-handed alpha
Helix 52
AF7
D
494 509Right-handed alpha
Helix 53
AF8
D
510 516Right-handed 310
Helix 54
AF9
D
517 532Right-handed alpha
Helix 55
AG1
D
534 557Right-handed alpha
Helix 56
AG2
D
592 606Right-handed alpha
Helix 57
AG3
D
618 634Right-handed alpha
Helix 58
AG4
D
637 652Right-handed alpha
Helix 59
AG5
D
652 673Right-handed alpha
Helix 60
AG6
D
724 729Right-handed alpha
Helix 61
AG7
B
75 86Right-handed alpha
Helix 62
AG8
B
93 102Right-handed alpha
Helix 63
AG9
B
118 126Right-handed alpha
Helix 64
AH1
B
134 144Right-handed alpha
Helix 65
AH2
B
165 173Right-handed alpha
Helix 66
AH3
B
175 185Right-handed alpha
Helix 67
AH4
B
195 199Right-handed 310
Helix 68
AH5
B
211 218Right-handed alpha
Helix 69
AH6
B
221 230Right-handed alpha
Helix 70
AH7
B
247 255Right-handed alpha
Helix 71
AH8
B
259 281Right-handed alpha
Helix 72
AH9
B
285 289Right-handed 310
Helix 73
AI1
B
296 304Right-handed alpha
Helix 74
AI2
B
306 315Right-handed alpha
Helix 75
AI3
B
353 360Right-handed alpha
Helix 76
AI4
B
367 371Right-handed 310
Helix 77
AI5
B
375 386Right-handed alpha
Helix 78
AI6
B
387 411Right-handed alpha
Helix 79
AI7
B
432 457Right-handed alpha
Helix 80
AI8
B
462 467Right-handed alpha
Helix 81
AI9
B
469 490Right-handed alpha
Helix 82
AJ1
B
494 509Right-handed alpha
Helix 83
AJ2
B
510 516Right-handed 310
Helix 84
AJ3
B
517 532Right-handed alpha
Helix 85
AJ4
B
534 557Right-handed alpha
Helix 86
AJ5
B
592 606Right-handed alpha
Helix 87
AJ6
B
618 634Right-handed alpha
Helix 88
AJ7
B
637 652Right-handed alpha
Helix 89
AJ8
B
652 673Right-handed alpha
Helix 90
AJ9
B
724 729Right-handed alpha
Helix 91
AK1
C
75 86Right-handed alpha
Helix 92
AK2
C
93 102Right-handed alpha
Helix 93
AK3
C
118 126Right-handed alpha
Helix 94
AK4
C
134 144Right-handed alpha
Helix 95
AK5
C
165 173Right-handed alpha
Helix 96
AK6
C
175 185Right-handed alpha
Helix 97
AK7
C
195 199Right-handed 310
Helix 98
AK8
C
211 218Right-handed alpha
Helix 99
AK9
C
221 230Right-handed alpha
Helix 100
AL1
C
247 255Right-handed alpha
Helix 101
AL2
C
259 281Right-handed alpha
Helix 102
AL3
C
285 289Right-handed 310
Helix 103
AL4
C
296 304Right-handed alpha
Helix 104
AL5
C
306 315Right-handed alpha
Helix 105
AL6
C
353 360Right-handed alpha
Helix 106
AL7
C
367 371Right-handed 310
Helix 107
AL8
C
375 386Right-handed alpha
Helix 108
AL9
C
387 411Right-handed alpha
Helix 109
AM1
C
432 457Right-handed alpha
Helix 110
AM2
C
462 467Right-handed alpha
Helix 111
AM3
C
469 490Right-handed alpha
Helix 112
AM4
C
494 509Right-handed alpha
Helix 113
AM5
C
510 516Right-handed 310
Helix 114
AM6
C
517 532Right-handed alpha
Helix 115
AM7
C
534 557Right-handed alpha
Helix 116
AM8
C
592 606Right-handed alpha
Helix 117
AM9
C
618 634Right-handed alpha
Helix 118
AN1
C
637 652Right-handed alpha
Helix 119
AN2
C
652 673Right-handed alpha
Helix 120
AN3
C
724 729Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 11HZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
327 333first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
698 709anti-parallel
Strand 4
A
686 692anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
327 333first strand
Strand 2
D
336 342anti-parallel
Strand 3
D
698 709anti-parallel
Strand 4
D
686 692anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
327 333first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
698 709anti-parallel
Strand 4
B
686 692anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
327 333first strand
Strand 2
C
336 342anti-parallel
Strand 3
C
698 709anti-parallel
Strand 4
C
686 692anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il