Analysis of interatomic Contacts of Structural Units in PDB entry:
11IB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11IB entry

There are 4 chains in PDB entry 11IB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 151ALA 728
D
 LEU 151ALA 728
B
 LEU 151ALA 728
C
 LEU 151ALA 728
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 11IB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
165 173Right-handed alpha
Helix 2
AA2
A
175 185Right-handed alpha
Helix 3
AA3
A
211 218Right-handed alpha
Helix 4
AA4
A
221 230Right-handed alpha
Helix 5
AA5
A
247 255Right-handed alpha
Helix 6
AA6
A
259 281Right-handed alpha
Helix 7
AA7
A
285 289Right-handed 310
Helix 8
AA8
A
296 304Right-handed alpha
Helix 9
AA9
A
306 315Right-handed alpha
Helix 10
AB1
A
353 361Right-handed alpha
Helix 11
AB2
A
375 386Right-handed alpha
Helix 12
AB3
A
387 397Right-handed alpha
Helix 13
AB4
A
398 411Right-handed alpha
Helix 14
AB5
A
432 457Right-handed alpha
Helix 15
AB6
A
460 468Right-handed alpha
Helix 16
AB7
A
469 489Right-handed alpha
Helix 17
AB8
A
495 509Right-handed alpha
Helix 18
AB9
A
510 516Right-handed 310
Helix 19
AC1
A
517 534Right-handed alpha
Helix 20
AC2
A
534 557Right-handed alpha
Helix 21
AC3
A
592 602Right-handed alpha
Helix 22
AC4
A
618 634Right-handed alpha
Helix 23
AC5
A
636 653Right-handed alpha
Helix 24
AC6
A
655 672Right-handed alpha
Helix 25
AC7
A
724 728Right-handed 310
Helix 26
AC8
D
165 173Right-handed alpha
Helix 27
AC9
D
175 185Right-handed alpha
Helix 28
AD1
D
211 218Right-handed alpha
Helix 29
AD2
D
221 230Right-handed alpha
Helix 30
AD3
D
247 255Right-handed alpha
Helix 31
AD4
D
259 281Right-handed alpha
Helix 32
AD5
D
285 289Right-handed 310
Helix 33
AD6
D
296 304Right-handed alpha
Helix 34
AD7
D
306 315Right-handed alpha
Helix 35
AD8
D
353 361Right-handed alpha
Helix 36
AD9
D
375 386Right-handed alpha
Helix 37
AE1
D
387 397Right-handed alpha
Helix 38
AE2
D
398 411Right-handed alpha
Helix 39
AE3
D
432 457Right-handed alpha
Helix 40
AE4
D
460 468Right-handed alpha
Helix 41
AE5
D
469 489Right-handed alpha
Helix 42
AE6
D
495 509Right-handed alpha
Helix 43
AE7
D
510 516Right-handed 310
Helix 44
AE8
D
517 534Right-handed alpha
Helix 45
AE9
D
534 557Right-handed alpha
Helix 46
AF1
D
592 602Right-handed alpha
Helix 47
AF2
D
618 634Right-handed alpha
Helix 48
AF3
D
636 653Right-handed alpha
Helix 49
AF4
D
655 672Right-handed alpha
Helix 50
AF5
D
724 728Right-handed 310
Helix 51
AF6
B
165 173Right-handed alpha
Helix 52
AF7
B
175 185Right-handed alpha
Helix 53
AF8
B
211 218Right-handed alpha
Helix 54
AF9
B
221 230Right-handed alpha
Helix 55
AG1
B
247 255Right-handed alpha
Helix 56
AG2
B
259 281Right-handed alpha
Helix 57
AG3
B
285 289Right-handed 310
Helix 58
AG4
B
296 304Right-handed alpha
Helix 59
AG5
B
306 315Right-handed alpha
Helix 60
AG6
B
353 361Right-handed alpha
Helix 61
AG7
B
375 386Right-handed alpha
Helix 62
AG8
B
387 397Right-handed alpha
Helix 63
AG9
B
398 411Right-handed alpha
Helix 64
AH1
B
432 457Right-handed alpha
Helix 65
AH2
B
460 468Right-handed alpha
Helix 66
AH3
B
469 489Right-handed alpha
Helix 67
AH4
B
495 509Right-handed alpha
Helix 68
AH5
B
510 516Right-handed 310
Helix 69
AH6
B
517 534Right-handed alpha
Helix 70
AH7
B
534 557Right-handed alpha
Helix 71
AH8
B
592 602Right-handed alpha
Helix 72
AH9
B
618 634Right-handed alpha
Helix 73
AI1
B
636 653Right-handed alpha
Helix 74
AI2
B
655 672Right-handed alpha
Helix 75
AI3
B
724 728Right-handed 310
Helix 76
AI4
C
165 173Right-handed alpha
Helix 77
AI5
C
175 185Right-handed alpha
Helix 78
AI6
C
211 218Right-handed alpha
Helix 79
AI7
C
221 230Right-handed alpha
Helix 80
AI8
C
247 255Right-handed alpha
Helix 81
AI9
C
259 281Right-handed alpha
Helix 82
AJ1
C
285 289Right-handed 310
Helix 83
AJ2
C
296 304Right-handed alpha
Helix 84
AJ3
C
306 315Right-handed alpha
Helix 85
AJ4
C
353 361Right-handed alpha
Helix 86
AJ5
C
375 386Right-handed alpha
Helix 87
AJ6
C
387 397Right-handed alpha
Helix 88
AJ7
C
398 411Right-handed alpha
Helix 89
AJ8
C
432 457Right-handed alpha
Helix 90
AJ9
C
460 468Right-handed alpha
Helix 91
AK1
C
469 489Right-handed alpha
Helix 92
AK2
C
495 509Right-handed alpha
Helix 93
AK3
C
510 516Right-handed 310
Helix 94
AK4
C
517 534Right-handed alpha
Helix 95
AK5
C
534 557Right-handed alpha
Helix 96
AK6
C
592 602Right-handed alpha
Helix 97
AK7
C
618 634Right-handed alpha
Helix 98
AK8
C
636 653Right-handed alpha
Helix 99
AK9
C
655 672Right-handed alpha
Helix 100
AL1
C
724 728Right-handed 310
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There are 4 sheets in PDB entry 11IB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 333first strand
Strand 2
A
336 342anti-parallel
Strand 3
A
700 709anti-parallel
Strand 4
A
686 689anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
327 333first strand
Strand 2
D
336 342anti-parallel
Strand 3
D
700 709anti-parallel
Strand 4
D
686 689anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 333first strand
Strand 2
B
336 342anti-parallel
Strand 3
B
700 709anti-parallel
Strand 4
B
686 689anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
327 333first strand
Strand 2
C
336 342anti-parallel
Strand 3
C
700 709anti-parallel
Strand 4
C
686 689anti-parallel
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