Analysis of interatomic Contacts of Structural Units in PDB entry:
11MX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11MX entry

There are 3 chains in PDB entry 11MX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASP 18	GLU 516
B	ASP 18	GLU 516
C	ASP 18	GLU 516

There are 26 helices in PDB entry 11MX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	73	80	Right-handed alpha
Helix 2	AA2	A	81	85	Right-handed 310
Helix 3	AA3	A	114	122	Right-handed alpha
Helix 4	AA4	A	135	140	Right-handed alpha
Helix 5	AA5	A	201	209	Right-handed alpha
Helix 6	AA6	A	382	402	Right-handed alpha
Helix 7	AA7	A	418	470	Right-handed alpha
Helix 8	AA8	A	489	498	Right-handed alpha
Helix 9	AA9	A	502	516	Right-handed alpha
Helix 10	AB1	B	73	80	Right-handed alpha
Helix 11	AB2	B	81	85	Right-handed 310
Helix 12	AB3	B	114	122	Right-handed alpha
Helix 13	AB4	B	201	210	Right-handed alpha
Helix 14	AB5	B	382	402	Right-handed alpha
Helix 15	AB6	B	418	470	Right-handed alpha
Helix 16	AB7	B	489	498	Right-handed alpha
Helix 17	AB8	B	502	516	Right-handed alpha
Helix 18	AB9	C	73	80	Right-handed alpha
Helix 19	AC1	C	81	87	Right-handed 310
Helix 20	AC2	C	114	122	Right-handed alpha
Helix 21	AC3	C	135	140	Right-handed alpha
Helix 22	AC4	C	201	210	Right-handed alpha
Helix 23	AC5	C	381	403	Right-handed alpha
Helix 24	AC6	C	418	469	Right-handed alpha
Helix 25	AC7	C	489	499	Right-handed alpha
Helix 26	AC8	C	502	515	Right-handed alpha

There are 33 sheets in PDB entry 11MX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	376	380	first strand
Strand 2	A	366	371	anti-parallel
Strand 3	A	19	24	anti-parallel
Strand 4	A	481	484	anti-parallel
Strand 5	A	474	476	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	33	first strand
Strand 2	A	41	42	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	46	48	first strand
Strand 2	A	330	332	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	51	first strand
Strand 2	A	309	310	parallel
Strand 3	A	322	323	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	61	first strand
Strand 2	A	289	294	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	67	69	first strand
Strand 2	A	96	98	parallel
Strand 3	A	282	284	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	132	first strand
Strand 2	A	270	276	anti-parallel
Strand 3	A	190	198	anti-parallel
Strand 4	A	265	268	anti-parallel
Strand 5	A	165	167	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	125	132	first strand
Strand 2	A	270	276	anti-parallel
Strand 3	A	190	198	anti-parallel
Strand 4	A	243	251	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	155	first strand
Strand 2	A	158	160	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	178	183	first strand
Strand 2	A	256	261	anti-parallel
Strand 3	A	216	219	anti-parallel
Strand 4	A	224	227	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	302	303	first strand
Strand 2	A	296	297	anti-parallel
Strand 3	A	317	318	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	376	380	first strand
Strand 2	B	366	371	anti-parallel
Strand 3	B	19	24	anti-parallel
Strand 4	B	481	484	anti-parallel
Strand 5	B	474	476	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	33	first strand
Strand 2	B	41	42	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	47	48	first strand
Strand 2	B	330	331	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	51	first strand
Strand 2	B	309	310	parallel
Strand 3	B	322	323	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	61	first strand
Strand 2	B	289	294	parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	67	69	first strand
Strand 2	B	96	98	parallel
Strand 3	B	282	284	parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	131	first strand
Strand 2	B	271	276	anti-parallel
Strand 3	B	190	198	anti-parallel
Strand 4	B	265	268	anti-parallel
Strand 5	B	165	167	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	125	131	first strand
Strand 2	B	271	276	anti-parallel
Strand 3	B	190	198	anti-parallel
Strand 4	B	243	251	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	150	155	first strand
Strand 2	B	158	160	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	178	183	first strand
Strand 2	B	256	261	anti-parallel
Strand 3	B	216	220	anti-parallel
Strand 4	B	224	227	anti-parallel

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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	301	303	first strand
Strand 2	B	296	298	anti-parallel
Strand 3	B	317	318	anti-parallel

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There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	376	380	first strand
Strand 2	C	366	371	anti-parallel
Strand 3	C	19	24	anti-parallel
Strand 4	C	481	484	anti-parallel
Strand 5	C	474	476	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	32	33	first strand
Strand 2	C	41	42	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	47	48	first strand
Strand 2	C	330	331	anti-parallel

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There are 3 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	51	first strand
Strand 2	C	309	310	parallel
Strand 3	C	322	323	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	58	61	first strand
Strand 2	C	289	294	parallel

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There are 3 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	67	69	first strand
Strand 2	C	96	98	parallel
Strand 3	C	282	284	parallel

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There are 5 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	132	first strand
Strand 2	C	270	276	anti-parallel
Strand 3	C	189	198	anti-parallel
Strand 4	C	265	268	anti-parallel
Strand 5	C	165	167	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	125	132	first strand
Strand 2	C	270	276	anti-parallel
Strand 3	C	189	198	anti-parallel
Strand 4	C	243	251	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	155	first strand
Strand 2	C	158	160	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	178	183	first strand
Strand 2	C	256	261	anti-parallel
Strand 3	C	216	219	anti-parallel
Strand 4	C	224	227	anti-parallel

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There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	302	303	first strand
Strand 2	C	296	297	anti-parallel
Strand 3	C	317	318	anti-parallel
Strand 4	C	408	409	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11MX

Analysis of interatomic Contacts of Structural Units in PDB entry:
11MX