Analysis of interatomic Contacts of Structural Units in PDB entry:
11NQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11NQ entry

There is 1 chain in PDB entry 11NQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9HIS 184
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 11NQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 18Right-handed alpha
Helix 2
AA2
A
19 21Right-handed 310
Helix 3
AA3
A
35 39Right-handed alpha
Helix 4
AA4
A
50 62Right-handed alpha
Helix 5
AA5
A
66 81Right-handed alpha
Helix 6
AA6
A
82 84Right-handed 310
Helix 7
AA7
A
85 93Right-handed alpha
Helix 8
AA8
A
94 103Right-handed alpha
Helix 9
AA9
A
110 122Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 11NQ.

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
28 31anti-parallel
Strand 3
A
138 142anti-parallel
Strand 4
A
125 129anti-parallel
Strand 5
A
152 157parallel
Strand 6
A
160 166anti-parallel
Strand 7
A
40 43anti-parallel
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