Analysis of interatomic Contacts of Structural Units in PDB entry:
11OH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11OH entry

There are 4 chains in PDB entry 11OH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 628	CYS 911
C	THR 475	VAL 912
D	GLY 289	VAL 912
B	THR 475	VAL 912

There are 68 helices in PDB entry 11OH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	644	654	Right-handed alpha
Helix 2	AA2	A	691	698	Right-handed alpha
Helix 3	AA3	A	724	742	Right-handed alpha
Helix 4	AA4	A	762	774	Right-handed alpha
Helix 5	AA5	A	894	903	Right-handed alpha
Helix 6	AA6	A	904	909	Right-handed alpha
Helix 7	AA7	C	476	485	Right-handed alpha
Helix 8	AA8	C	489	493	Right-handed 310
Helix 9	AA9	C	514	524	Right-handed alpha
Helix 10	AB1	C	559	567	Right-handed alpha
Helix 11	AB2	C	570	578	Right-handed alpha
Helix 12	AB3	C	600	609	Right-handed alpha
Helix 13	AB4	C	644	653	Right-handed alpha
Helix 14	AB5	C	666	677	Right-handed alpha
Helix 15	AB6	C	686	690	Right-handed 310
Helix 16	AB7	C	691	699	Right-handed alpha
Helix 17	AB8	C	728	740	Right-handed alpha
Helix 18	AB9	C	762	774	Right-handed alpha
Helix 19	AC1	C	783	785	Right-handed 310
Helix 20	AC2	C	814	819	Right-handed alpha
Helix 21	AC3	C	835	839	Right-handed 310
Helix 22	AC4	C	860	868	Right-handed alpha
Helix 23	AC5	C	881	890	Right-handed alpha
Helix 24	AC6	C	894	903	Right-handed alpha
Helix 25	AC7	C	904	909	Right-handed alpha
Helix 26	AC8	D	313	317	Right-handed 310
Helix 27	AC9	D	340	344	Right-handed 310
Helix 28	AD1	D	356	362	Right-handed alpha
Helix 29	AD2	D	362	381	Right-handed alpha
Helix 30	AD3	D	395	412	Right-handed alpha
Helix 31	AD4	D	418	423	Right-handed 310
Helix 32	AD5	D	474	485	Right-handed alpha
Helix 33	AD6	D	489	493	Right-handed 310
Helix 34	AD7	D	514	524	Right-handed alpha
Helix 35	AD8	D	559	567	Right-handed alpha
Helix 36	AD9	D	570	578	Right-handed alpha
Helix 37	AE1	D	600	611	Right-handed alpha
Helix 38	AE2	D	627	631	Right-handed 310
Helix 39	AE3	D	644	653	Right-handed alpha
Helix 40	AE4	D	666	677	Right-handed alpha
Helix 41	AE5	D	691	698	Right-handed alpha
Helix 42	AE6	D	725	728	Right-handed 310
Helix 43	AE7	D	729	742	Right-handed alpha
Helix 44	AE8	D	762	774	Right-handed alpha
Helix 45	AE9	D	783	785	Right-handed 310
Helix 46	AF1	D	814	819	Right-handed alpha
Helix 47	AF2	D	860	868	Right-handed alpha
Helix 48	AF3	D	881	890	Right-handed alpha
Helix 49	AF4	D	894	903	Right-handed alpha
Helix 50	AF5	D	904	909	Right-handed 310
Helix 51	AF6	B	476	485	Right-handed alpha
Helix 52	AF7	B	489	493	Right-handed 310
Helix 53	AF8	B	514	524	Right-handed alpha
Helix 54	AF9	B	559	567	Right-handed alpha
Helix 55	AG1	B	570	578	Right-handed alpha
Helix 56	AG2	B	600	609	Right-handed alpha
Helix 57	AG3	B	644	653	Right-handed alpha
Helix 58	AG4	B	666	677	Right-handed alpha
Helix 59	AG5	B	691	699	Right-handed alpha
Helix 60	AG6	B	725	742	Right-handed alpha
Helix 61	AG7	B	762	774	Right-handed alpha
Helix 62	AG8	B	783	785	Right-handed 310
Helix 63	AG9	B	814	819	Right-handed alpha
Helix 64	AH1	B	835	839	Right-handed 310
Helix 65	AH2	B	860	868	Right-handed alpha
Helix 66	AH3	B	881	890	Right-handed alpha
Helix 67	AH4	B	894	903	Right-handed alpha
Helix 68	AH5	B	904	909	Right-handed alpha

There are 11 sheets in PDB entry 11OH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	684	first strand
Strand 2	A	657	663	parallel
Strand 3	A	634	639	parallel
Strand 4	A	703	706	parallel
Strand 5	A	752	757	parallel
Strand 6	A	792	796	anti-parallel
Strand 7	A	778	780	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	504	505	first strand
Strand 2	C	512	513	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	591	592	first strand
Strand 2	C	595	596	anti-parallel

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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	681	683	first strand
Strand 2	C	657	663	parallel
Strand 3	C	634	639	parallel
Strand 4	C	703	705	parallel
Strand 5	C	752	758	parallel
Strand 6	C	791	796	anti-parallel
Strand 7	C	778	781	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	823	825	first strand
Strand 2	C	850	852	anti-parallel
Strand 3	C	855	857	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	296	298	first strand
Strand 2	D	306	310	anti-parallel
Strand 3	D	326	329	anti-parallel
Strand 4	D	336	339	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	657	660	first strand
Strand 2	D	634	639	parallel
Strand 3	D	704	706	parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	754	758	first strand
Strand 2	D	791	796	anti-parallel
Strand 3	D	778	781	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	824	825	first strand
Strand 2	D	850	851	anti-parallel
Strand 3	D	856	857	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	681	683	first strand
Strand 2	B	659	663	parallel
Strand 3	B	635	639	parallel
Strand 4	B	703	706	parallel
Strand 5	B	752	758	parallel
Strand 6	B	791	796	anti-parallel
Strand 7	B	778	781	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	823	825	first strand
Strand 2	B	850	852	anti-parallel
Strand 3	B	855	857	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11OH

Analysis of interatomic Contacts of Structural Units in PDB entry:
11OH