Analysis of interatomic Contacts of Structural Units in PDB entry:
11OO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11OO entry

There are 4 chains in PDB entry 11OO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 GLU 1CYS 216
A
 HIS 331LYS 527
K
 GLU 1SER 120
H
 GLN 1CYS 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 11OO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
123 128Right-handed alpha
Helix 2
AA2
L
185 190Right-handed alpha
Helix 3
AA3
A
337 343Right-handed alpha
Helix 4
AA4
A
349 353Right-handed 310
Helix 5
AA5
A
366 371Right-handed 310
Helix 6
AA6
A
386 390Right-handed 310
Helix 7
AA7
A
403 410Right-handed 310
Helix 8
AA8
A
417 422Right-handed alpha
Helix 9
AA9
A
438 443Right-handed alpha
Helix 10
AB1
K
87 91Right-handed 310
Helix 11
AB2
H
28 32Right-handed 310
Helix 12
AB3
H
87 91Right-handed 310
Helix 13
AB4
H
159 161Right-handed 310
Helix 14
AB5
H
190 194Right-handed 310
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There are 17 sheets in PDB entry 11OO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 25anti-parallel
Strand 3
L
71 76anti-parallel
Strand 4
L
63 68anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 12first strand
Strand 2
L
104 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
34 39anti-parallel
Strand 5
L
46 50anti-parallel
Strand 6
L
54 55anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 12first strand
Strand 2
L
104 107parallel
Strand 3
L
86 91anti-parallel
Strand 4
L
99 100anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
116 120first strand
Strand 2
L
131 141anti-parallel
Strand 3
L
175 184anti-parallel
Strand 4
L
161 165anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
155 157first strand
Strand 2
L
147 152anti-parallel
Strand 3
L
193 199anti-parallel
Strand 4
L
207 212anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 358first strand
Strand 2
A
395 402anti-parallel
Strand 3
A
508 514anti-parallel
Strand 4
A
431 437anti-parallel
Strand 5
A
376 380anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
452 454first strand
Strand 2
A
492 494anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
473 474first strand
Strand 2
A
488 489anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
5 6first strand
Strand 2
K
21 23anti-parallel
Strand 3
K
78 80anti-parallel
Strand 4
K
71 73anti-parallel
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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
58 60first strand
Strand 2
K
46 51anti-parallel
Strand 3
K
33 39anti-parallel
Strand 4
K
92 99anti-parallel
Strand 5
K
108 111anti-parallel
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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
58 60first strand
Strand 2
K
46 51anti-parallel
Strand 3
K
33 39anti-parallel
Strand 4
K
92 99anti-parallel
Strand 5
K
115 117anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 7first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
68 73anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
110 114parallel
Strand 3
H
92 95anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
45 50anti-parallel
Strand 6
H
59 60anti-parallel
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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
11 12first strand
Strand 2
H
110 114parallel
Strand 3
H
92 95anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
98 99anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
123 127first strand
Strand 2
H
138 148anti-parallel
Strand 3
H
179 188anti-parallel
Strand 4
H
166 168anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
123 127first strand
Strand 2
H
138 148anti-parallel
Strand 3
H
179 188anti-parallel
Strand 4
H
172 173anti-parallel
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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
154 157first strand
Strand 2
H
197 203anti-parallel
Strand 3
H
208 214anti-parallel
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