Analysis of interatomic Contacts of Structural Units in PDB entry:
11PU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11PU entry

There are 2 chains in PDB entry 11PU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 6MET 175
C
 LEU 6MET 175
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 11PU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 57Right-handed alpha
Helix 2
AA2
A
62 76Right-handed alpha
Helix 3
AA3
A
95 101Right-handed alpha
Helix 4
AA4
A
102 107Right-handed 310
Helix 5
AA5
A
111 123Right-handed alpha
Helix 6
AA6
C
46 57Right-handed alpha
Helix 7
AA7
C
62 78Right-handed alpha
Helix 8
AA8
C
95 102Right-handed alpha
Helix 9
AA9
C
103 107Right-handed 310
Helix 10
AB1
C
111 123Right-handed alpha
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There are 2 sheets in PDB entry 11PU. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 23first strand
Strand 2
A
27 30anti-parallel
Strand 3
A
33 37anti-parallel
Strand 4
A
163 170anti-parallel
Strand 5
A
150 157anti-parallel
Strand 6
A
125 132parallel
Strand 7
A
136 144anti-parallel
Strand 8
A
7 14anti-parallel
Strand 9
A
81 86parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
21 23first strand
Strand 2
C
27 30anti-parallel
Strand 3
C
33 37anti-parallel
Strand 4
C
163 170anti-parallel
Strand 5
C
150 157anti-parallel
Strand 6
C
125 132parallel
Strand 7
C
136 144anti-parallel
Strand 8
C
7 14anti-parallel
Strand 9
C
81 86parallel
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