Analysis of interatomic Contacts of Structural Units in PDB entry:
11RL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11RL entry

There are 8 chains in PDB entry 11RL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	ASP 268	GLU 574
D	ILE 12	SER 431
H	G 1	C 29
I	G 1	C 29
A	ARG 468	ASP 860
C	MET 1	THR 707
E	LEU 4	LEU 435
G	GLU 153	THR 557

There are135 helices in PDB entry 11RL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	268	278	Right-handed alpha
Helix 2	AA2	B	283	293	Right-handed alpha
Helix 3	AA3	B	294	296	Right-handed 310
Helix 4	AA4	B	297	307	Right-handed alpha
Helix 5	AA5	B	319	330	Right-handed alpha
Helix 6	AA6	B	347	359	Right-handed alpha
Helix 7	AA7	B	368	383	Right-handed alpha
Helix 8	AA8	B	402	414	Right-handed alpha
Helix 9	AA9	B	428	433	Right-handed 310
Helix 10	AB1	B	434	442	Right-handed alpha
Helix 11	AB2	B	463	468	Right-handed alpha
Helix 12	AB3	B	473	483	Right-handed alpha
Helix 13	AB4	B	485	502	Right-handed alpha
Helix 14	AB5	B	513	523	Right-handed alpha
Helix 15	AB6	B	528	542	Right-handed alpha
Helix 16	AB7	B	562	573	Right-handed alpha
Helix 17	AB8	D	13	29	Right-handed alpha
Helix 18	AB9	D	40	58	Right-handed alpha
Helix 19	AC1	D	72	87	Right-handed alpha
Helix 20	AC2	D	106	119	Right-handed alpha
Helix 21	AC3	D	131	145	Right-handed alpha
Helix 22	AC4	D	160	166	Right-handed alpha
Helix 23	AC5	D	167	169	Right-handed 310
Helix 24	AC6	D	170	181	Right-handed alpha
Helix 25	AC7	D	197	202	Right-handed alpha
Helix 26	AC8	D	203	210	Right-handed alpha
Helix 27	AC9	D	222	235	Right-handed alpha
Helix 28	AD1	D	242	259	Right-handed alpha
Helix 29	AD2	D	259	273	Right-handed alpha
Helix 30	AD3	D	275	288	Right-handed alpha
Helix 31	AD4	D	298	310	Right-handed alpha
Helix 32	AD5	D	312	320	Right-handed alpha
Helix 33	AD6	D	322	339	Right-handed alpha
Helix 34	AD7	D	345	359	Right-handed alpha
Helix 35	AD8	D	368	382	Right-handed alpha
Helix 36	AD9	D	407	417	Right-handed alpha
Helix 37	AE1	D	422	431	Right-handed alpha
Helix 38	AE2	A	486	496	Right-handed alpha
Helix 39	AE3	A	507	524	Right-handed alpha
Helix 40	AE4	A	539	557	Right-handed alpha
Helix 41	AE5	A	571	573	Right-handed 310
Helix 42	AE6	A	575	577	Right-handed 310
Helix 43	AE7	A	578	588	Right-handed alpha
Helix 44	AE8	A	593	607	Right-handed alpha
Helix 45	AE9	A	622	626	Right-handed 310
Helix 46	AF1	A	630	639	Right-handed alpha
Helix 47	AF2	A	640	642	Right-handed 310
Helix 48	AF3	A	657	662	Right-handed alpha
Helix 49	AF4	A	664	672	Right-handed alpha
Helix 50	AF5	A	682	694	Right-handed alpha
Helix 51	AF6	A	701	716	Right-handed alpha
Helix 52	AF7	A	718	736	Right-handed alpha
Helix 53	AF8	A	747	759	Right-handed alpha
Helix 54	AF9	A	762	769	Right-handed alpha
Helix 55	AG1	A	771	789	Right-handed alpha
Helix 56	AG2	A	795	810	Right-handed alpha
Helix 57	AG3	A	815	829	Right-handed alpha
Helix 58	AG4	A	836	842	Right-handed 310
Helix 59	AG5	A	850	858	Right-handed alpha
Helix 60	AG6	C	25	31	Right-handed alpha
Helix 61	AG7	C	39	66	Right-handed alpha
Helix 62	AG8	C	66	86	Right-handed alpha
Helix 63	AG9	C	110	129	Right-handed alpha
Helix 64	AH1	C	137	141	Right-handed 310
Helix 65	AH2	C	143	158	Right-handed alpha
Helix 66	AH3	C	180	193	Right-handed alpha
Helix 67	AH4	C	226	239	Right-handed alpha
Helix 68	AH5	C	257	263	Right-handed alpha
Helix 69	AH6	C	264	269	Right-handed alpha
Helix 70	AH7	C	280	293	Right-handed alpha
Helix 71	AH8	C	303	317	Right-handed alpha
Helix 72	AH9	C	320	339	Right-handed alpha
Helix 73	AI1	C	340	345	Right-handed 310
Helix 74	AI2	C	347	357	Right-handed alpha
Helix 75	AI3	C	359	368	Right-handed alpha
Helix 76	AI4	C	369	377	Right-handed alpha
Helix 77	AI5	C	380	390	Right-handed alpha
Helix 78	AI6	C	390	426	Right-handed alpha
Helix 79	AI7	C	434	444	Right-handed alpha
Helix 80	AI8	C	450	461	Right-handed alpha
Helix 81	AI9	C	464	482	Right-handed alpha
Helix 82	AJ1	C	487	500	Right-handed alpha
Helix 83	AJ2	C	548	567	Right-handed alpha
Helix 84	AJ3	C	569	573	Right-handed 310
Helix 85	AJ4	C	575	578	Right-handed 310
Helix 86	AJ5	C	583	592	Right-handed alpha
Helix 87	AJ6	C	594	605	Right-handed alpha
Helix 88	AJ7	C	606	609	Right-handed 310
Helix 89	AJ8	C	612	616	Right-handed 310
Helix 90	AJ9	C	627	638	Right-handed alpha
Helix 91	AK1	C	645	661	Right-handed alpha
Helix 92	AK2	C	670	691	Right-handed alpha
Helix 93	AK3	E	11	23	Right-handed alpha
Helix 94	AK4	E	42	54	Right-handed alpha
Helix 95	AK5	E	68	84	Right-handed alpha
Helix 96	AK6	E	98	110	Right-handed alpha
Helix 97	AK7	E	112	117	Right-handed alpha
Helix 98	AK8	E	127	130	Right-handed 310
Helix 99	AK9	E	136	143	Right-handed alpha
Helix 100	AL1	E	143	149	Right-handed alpha
Helix 101	AL2	E	161	165	Right-handed 310
Helix 102	AL3	E	183	194	Right-handed alpha
Helix 103	AL4	E	200	216	Right-handed alpha
Helix 104	AL5	E	221	237	Right-handed alpha
Helix 105	AL6	E	237	242	Right-handed alpha
Helix 106	AL7	E	249	266	Right-handed alpha
Helix 107	AL8	E	303	318	Right-handed alpha
Helix 108	AL9	E	348	353	Right-handed alpha
Helix 109	AM1	E	359	370	Right-handed alpha
Helix 110	AM2	E	377	390	Right-handed alpha
Helix 111	AM3	E	412	423	Right-handed alpha
Helix 112	AM4	E	426	431	Right-handed alpha
Helix 113	AM5	G	155	164	Right-handed alpha
Helix 114	AM6	G	175	191	Right-handed alpha
Helix 115	AM7	G	207	223	Right-handed alpha
Helix 116	AM8	G	238	240	Right-handed 310
Helix 117	AM9	G	241	250	Right-handed alpha
Helix 118	AN1	G	260	272	Right-handed alpha
Helix 119	AN2	G	286	290	Right-handed 310
Helix 120	AN3	G	291	293	Right-handed 310
Helix 121	AN4	G	294	303	Right-handed alpha
Helix 122	AN5	G	304	306	Right-handed 310
Helix 123	AN6	G	321	326	Right-handed alpha
Helix 124	AN7	G	327	333	Right-handed alpha
Helix 125	AN8	G	347	360	Right-handed alpha
Helix 126	AN9	G	369	384	Right-handed alpha
Helix 127	AO1	G	386	408	Right-handed alpha
Helix 128	AO2	G	430	443	Right-handed alpha
Helix 129	AO3	G	458	476	Right-handed alpha
Helix 130	AO4	G	482	496	Right-handed alpha
Helix 131	AO5	G	502	504	Right-handed 310
Helix 132	AO6	G	505	516	Right-handed alpha
Helix 133	AO7	G	526	529	Right-handed 310
Helix 134	AO8	G	537	546	Right-handed alpha
Helix 135	AO9	G	548	557	Right-handed alpha

There are 14 sheets in PDB entry 11RL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	443	447	first strand
Strand 2	B	310	314	parallel
Strand 3	B	418	424	parallel
Strand 4	B	388	392	parallel
Strand 5	B	336	339	parallel
Strand 6	C	10	13	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	511	512	first strand
Strand 2	B	556	558	anti-parallel
Strand 3	B	546	548	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	95	100	first strand
Strand 2	D	154	159	parallel
Strand 3	D	187	193	parallel
Strand 4	D	61	66	parallel
Strand 5	D	214	216	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	123	124	first strand
Strand 2	D	127	128	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	385	387	first strand
Strand 2	D	402	404	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	563	569	first strand
Strand 2	A	614	620	parallel
Strand 3	A	647	652	parallel
Strand 4	A	528	534	parallel
Strand 5	A	675	678	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	792	794	first strand
Strand 2	A	844	847	anti-parallel
Strand 3	A	832	833	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	136	first strand
Strand 2	C	215	219	parallel
Strand 3	C	246	252	parallel
Strand 4	C	100	106	parallel
Strand 5	C	271	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	302	first strand
Strand 2	C	580	581	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	642	644	first strand
Strand 2	C	702	705	anti-parallel
Strand 3	C	693	695	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	58	62	first strand
Strand 2	E	120	125	parallel
Strand 3	E	152	158	parallel
Strand 4	E	32	36	parallel
Strand 5	E	175	178	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	357	358	first strand
Strand 2	E	406	409	anti-parallel
Strand 3	E	393	396	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	226	232	first strand
Strand 2	G	278	284	parallel
Strand 3	G	311	316	parallel
Strand 4	G	196	202	parallel
Strand 5	G	339	343	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	480	481	first strand
Strand 2	G	531	534	anti-parallel
Strand 3	G	519	522	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11RL

Analysis of interatomic Contacts of Structural Units in PDB entry:
11RL