Analysis of interatomic Contacts of Structural Units in PDB entry:
11RN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11RN entry

There are 4 chains in PDB entry 11RN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 122ASN 758
B
 LEU 122ASN 758
X
 TRP 8ASN 69
Y
 TRP 8ASN 69
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 11RN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
123 136Right-handed alpha
Helix 2
AA2
A
139 147Right-handed alpha
Helix 3
AA3
A
159 176Right-handed alpha
Helix 4
AA4
A
239 245Right-handed alpha
Helix 5
AA5
A
263 274Right-handed alpha
Helix 6
AA6
A
316 320Right-handed 310
Helix 7
AA7
A
338 347Right-handed alpha
Helix 8
AA8
A
354 358Right-handed 310
Helix 9
AA9
A
419 440Right-handed alpha
Helix 10
AB1
A
455 459Right-handed 310
Helix 11
AB2
A
460 470Right-handed alpha
Helix 12
AB3
A
470 475Right-handed alpha
Helix 13
AB4
A
502 511Right-handed alpha
Helix 14
AB5
A
527 532Right-handed alpha
Helix 15
AB6
A
540 547Right-handed alpha
Helix 16
AB7
A
572 580Right-handed alpha
Helix 17
AB8
A
582 603Right-handed alpha
Helix 18
AB9
A
610 612Right-handed 310
Helix 19
AC1
A
613 626Right-handed alpha
Helix 20
AC2
A
628 635Right-handed alpha
Helix 21
AC3
A
639 663Right-handed alpha
Helix 22
AC4
A
667 680Right-handed alpha
Helix 23
AC5
A
681 686Right-handed 310
Helix 24
AC6
A
708 717Right-handed alpha
Helix 25
AC7
A
718 721Right-handed 310
Helix 26
AC8
A
727 751Right-handed alpha
Helix 27
AC9
A
752 756Right-handed 310
Helix 28
AD1
B
123 136Right-handed alpha
Helix 29
AD2
B
139 147Right-handed alpha
Helix 30
AD3
B
159 176Right-handed alpha
Helix 31
AD4
B
239 245Right-handed alpha
Helix 32
AD5
B
263 274Right-handed alpha
Helix 33
AD6
B
316 320Right-handed 310
Helix 34
AD7
B
338 347Right-handed alpha
Helix 35
AD8
B
354 358Right-handed 310
Helix 36
AD9
B
419 440Right-handed alpha
Helix 37
AE1
B
460 470Right-handed alpha
Helix 38
AE2
B
470 475Right-handed alpha
Helix 39
AE3
B
502 511Right-handed alpha
Helix 40
AE4
B
527 532Right-handed alpha
Helix 41
AE5
B
540 547Right-handed alpha
Helix 42
AE6
B
572 580Right-handed alpha
Helix 43
AE7
B
582 603Right-handed alpha
Helix 44
AE8
B
610 612Right-handed 310
Helix 45
AE9
B
613 626Right-handed alpha
Helix 46
AF1
B
628 635Right-handed alpha
Helix 47
AF2
B
639 663Right-handed alpha
Helix 48
AF3
B
667 680Right-handed alpha
Helix 49
AF4
B
681 686Right-handed 310
Helix 50
AF5
B
708 717Right-handed alpha
Helix 51
AF6
B
718 721Right-handed 310
Helix 52
AF7
B
727 750Right-handed alpha
Helix 53
AF8
B
752 756Right-handed 310
Helix 54
AF9
X
13 32Right-handed alpha
Helix 55
AG1
X
34 44Right-handed alpha
Helix 56
AG2
X
55 57Right-handed 310
Helix 57
AG3
X
58 67Right-handed alpha
Helix 58
AG4
Y
13 31Right-handed alpha
Helix 59
AG5
Y
34 44Right-handed alpha
Helix 60
AG6
Y
57 68Right-handed alpha
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There are 8 sheets in PDB entry 11RN. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
180 192first strand
Strand 2
A
380 393anti-parallel
Strand 3
A
446 453anti-parallel
Strand 4
A
398 408parallel
Strand 5
A
478 483parallel
Strand 6
A
552 558parallel
Strand 7
A
493 498anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
210 214first strand
Strand 2
A
199 204anti-parallel
Strand 3
A
371 377anti-parallel
Strand 4
A
226 230anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 221first strand
Strand 2
A
299 300parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 234first strand
Strand 2
A
254 258parallel
Strand 3
A
278 282parallel
Strand 4
A
334 336parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
180 192first strand
Strand 2
B
380 393anti-parallel
Strand 3
B
446 453anti-parallel
Strand 4
B
398 408parallel
Strand 5
B
478 483parallel
Strand 6
B
552 558parallel
Strand 7
B
493 498anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
210 214first strand
Strand 2
B
199 204anti-parallel
Strand 3
B
371 377anti-parallel
Strand 4
B
226 230anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
220 221first strand
Strand 2
B
299 300parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
232 234first strand
Strand 2
B
254 258parallel
Strand 3
B
278 282parallel
Strand 4
B
334 336parallel
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