Analysis of interatomic Contacts of Structural Units in PDB entry:
11SO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11SO entry

There are 7 chains in PDB entry 11SO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 254	SER 1085
B	LEU 254	SER 1085
C	LEU 254	SER 1085
D	LEU 254	SER 1085
E	LEU 254	SER 1085
F	LEU 254	SER 1085
G	LEU 254	SER 1085

There are175 helices in PDB entry 11SO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	255	306	Right-handed alpha
Helix 2	AA2	A	313	326	Right-handed alpha
Helix 3	AA3	A	335	362	Right-handed alpha
Helix 4	AA4	A	375	426	Right-handed alpha
Helix 5	AA5	A	442	454	Right-handed alpha
Helix 6	AA6	A	456	472	Right-handed alpha
Helix 7	AA7	A	475	506	Right-handed alpha
Helix 8	AA8	A	514	530	Right-handed alpha
Helix 9	AA9	A	530	542	Right-handed alpha
Helix 10	AB1	A	549	573	Right-handed alpha
Helix 11	AB2	A	589	618	Right-handed alpha
Helix 12	AB3	A	624	651	Right-handed alpha
Helix 13	AB4	A	666	672	Right-handed alpha
Helix 14	AB5	A	672	688	Right-handed alpha
Helix 15	AB6	A	691	751	Right-handed alpha
Helix 16	AB7	A	774	798	Right-handed alpha
Helix 17	AB8	A	800	808	Right-handed alpha
Helix 18	AB9	A	830	860	Right-handed alpha
Helix 19	AC1	A	870	893	Right-handed alpha
Helix 20	AC2	A	895	900	Right-handed 310
Helix 21	AC3	A	901	913	Right-handed alpha
Helix 22	AC4	A	915	932	Right-handed alpha
Helix 23	AC5	A	972	975	Right-handed 310
Helix 24	AC6	A	1002	1017	Right-handed alpha
Helix 25	AC7	A	1051	1071	Right-handed alpha
Helix 26	AC8	B	255	306	Right-handed alpha
Helix 27	AC9	B	313	326	Right-handed alpha
Helix 28	AD1	B	335	362	Right-handed alpha
Helix 29	AD2	B	375	426	Right-handed alpha
Helix 30	AD3	B	442	454	Right-handed alpha
Helix 31	AD4	B	456	472	Right-handed alpha
Helix 32	AD5	B	475	506	Right-handed alpha
Helix 33	AD6	B	514	530	Right-handed alpha
Helix 34	AD7	B	530	542	Right-handed alpha
Helix 35	AD8	B	549	573	Right-handed alpha
Helix 36	AD9	B	589	618	Right-handed alpha
Helix 37	AE1	B	624	651	Right-handed alpha
Helix 38	AE2	B	666	672	Right-handed alpha
Helix 39	AE3	B	672	688	Right-handed alpha
Helix 40	AE4	B	691	751	Right-handed alpha
Helix 41	AE5	B	774	798	Right-handed alpha
Helix 42	AE6	B	800	808	Right-handed alpha
Helix 43	AE7	B	830	860	Right-handed alpha
Helix 44	AE8	B	870	893	Right-handed alpha
Helix 45	AE9	B	895	900	Right-handed 310
Helix 46	AF1	B	901	913	Right-handed alpha
Helix 47	AF2	B	915	932	Right-handed alpha
Helix 48	AF3	B	972	975	Right-handed 310
Helix 49	AF4	B	1002	1017	Right-handed alpha
Helix 50	AF5	B	1051	1071	Right-handed alpha
Helix 51	AF6	C	255	306	Right-handed alpha
Helix 52	AF7	C	313	326	Right-handed alpha
Helix 53	AF8	C	335	362	Right-handed alpha
Helix 54	AF9	C	375	426	Right-handed alpha
Helix 55	AG1	C	442	454	Right-handed alpha
Helix 56	AG2	C	456	472	Right-handed alpha
Helix 57	AG3	C	475	506	Right-handed alpha
Helix 58	AG4	C	514	530	Right-handed alpha
Helix 59	AG5	C	530	542	Right-handed alpha
Helix 60	AG6	C	549	573	Right-handed alpha
Helix 61	AG7	C	589	618	Right-handed alpha
Helix 62	AG8	C	624	651	Right-handed alpha
Helix 63	AG9	C	666	672	Right-handed alpha
Helix 64	AH1	C	672	688	Right-handed alpha
Helix 65	AH2	C	691	751	Right-handed alpha
Helix 66	AH3	C	774	798	Right-handed alpha
Helix 67	AH4	C	800	808	Right-handed alpha
Helix 68	AH5	C	830	860	Right-handed alpha
Helix 69	AH6	C	870	893	Right-handed alpha
Helix 70	AH7	C	895	900	Right-handed 310
Helix 71	AH8	C	901	913	Right-handed alpha
Helix 72	AH9	C	915	932	Right-handed alpha
Helix 73	AI1	C	972	975	Right-handed 310
Helix 74	AI2	C	1002	1017	Right-handed alpha
Helix 75	AI3	C	1051	1071	Right-handed alpha
Helix 76	AI4	D	255	306	Right-handed alpha
Helix 77	AI5	D	313	326	Right-handed alpha
Helix 78	AI6	D	335	362	Right-handed alpha
Helix 79	AI7	D	375	426	Right-handed alpha
Helix 80	AI8	D	442	454	Right-handed alpha
Helix 81	AI9	D	456	472	Right-handed alpha
Helix 82	AJ1	D	475	506	Right-handed alpha
Helix 83	AJ2	D	514	530	Right-handed alpha
Helix 84	AJ3	D	530	542	Right-handed alpha
Helix 85	AJ4	D	549	573	Right-handed alpha
Helix 86	AJ5	D	589	618	Right-handed alpha
Helix 87	AJ6	D	624	651	Right-handed alpha
Helix 88	AJ7	D	666	672	Right-handed alpha
Helix 89	AJ8	D	672	688	Right-handed alpha
Helix 90	AJ9	D	691	751	Right-handed alpha
Helix 91	AK1	D	774	798	Right-handed alpha
Helix 92	AK2	D	800	808	Right-handed alpha
Helix 93	AK3	D	830	860	Right-handed alpha
Helix 94	AK4	D	870	893	Right-handed alpha
Helix 95	AK5	D	895	900	Right-handed 310
Helix 96	AK6	D	901	913	Right-handed alpha
Helix 97	AK7	D	915	932	Right-handed alpha
Helix 98	AK8	D	972	975	Right-handed 310
Helix 99	AK9	D	1002	1017	Right-handed alpha
Helix 100	AL1	D	1051	1071	Right-handed alpha
Helix 101	AL2	E	255	306	Right-handed alpha
Helix 102	AL3	E	313	326	Right-handed alpha
Helix 103	AL4	E	335	362	Right-handed alpha
Helix 104	AL5	E	375	426	Right-handed alpha
Helix 105	AL6	E	442	454	Right-handed alpha
Helix 106	AL7	E	456	472	Right-handed alpha
Helix 107	AL8	E	475	506	Right-handed alpha
Helix 108	AL9	E	514	530	Right-handed alpha
Helix 109	AM1	E	530	542	Right-handed alpha
Helix 110	AM2	E	549	573	Right-handed alpha
Helix 111	AM3	E	589	618	Right-handed alpha
Helix 112	AM4	E	624	651	Right-handed alpha
Helix 113	AM5	E	666	672	Right-handed alpha
Helix 114	AM6	E	672	688	Right-handed alpha
Helix 115	AM7	E	691	751	Right-handed alpha
Helix 116	AM8	E	774	798	Right-handed alpha
Helix 117	AM9	E	800	808	Right-handed alpha
Helix 118	AN1	E	830	860	Right-handed alpha
Helix 119	AN2	E	870	893	Right-handed alpha
Helix 120	AN3	E	895	900	Right-handed 310
Helix 121	AN4	E	901	913	Right-handed alpha
Helix 122	AN5	E	915	932	Right-handed alpha
Helix 123	AN6	E	972	975	Right-handed 310
Helix 124	AN7	E	1002	1017	Right-handed alpha
Helix 125	AN8	E	1051	1071	Right-handed alpha
Helix 126	AN9	F	255	306	Right-handed alpha
Helix 127	AO1	F	313	326	Right-handed alpha
Helix 128	AO2	F	335	362	Right-handed alpha
Helix 129	AO3	F	375	426	Right-handed alpha
Helix 130	AO4	F	442	454	Right-handed alpha
Helix 131	AO5	F	456	472	Right-handed alpha
Helix 132	AO6	F	475	506	Right-handed alpha
Helix 133	AO7	F	514	530	Right-handed alpha
Helix 134	AO8	F	530	542	Right-handed alpha
Helix 135	AO9	F	549	573	Right-handed alpha
Helix 136	AP1	F	589	618	Right-handed alpha
Helix 137	AP2	F	624	651	Right-handed alpha
Helix 138	AP3	F	666	672	Right-handed alpha
Helix 139	AP4	F	672	688	Right-handed alpha
Helix 140	AP5	F	691	751	Right-handed alpha
Helix 141	AP6	F	774	798	Right-handed alpha
Helix 142	AP7	F	800	808	Right-handed alpha
Helix 143	AP8	F	830	860	Right-handed alpha
Helix 144	AP9	F	870	893	Right-handed alpha
Helix 145	AQ1	F	895	900	Right-handed 310
Helix 146	AQ2	F	901	913	Right-handed alpha
Helix 147	AQ3	F	915	932	Right-handed alpha
Helix 148	AQ4	F	972	975	Right-handed 310
Helix 149	AQ5	F	1002	1017	Right-handed alpha
Helix 150	AQ6	F	1051	1071	Right-handed alpha
Helix 151	AQ7	G	255	306	Right-handed alpha
Helix 152	AQ8	G	313	326	Right-handed alpha
Helix 153	AQ9	G	335	362	Right-handed alpha
Helix 154	AR1	G	375	426	Right-handed alpha
Helix 155	AR2	G	442	454	Right-handed alpha
Helix 156	AR3	G	456	472	Right-handed alpha
Helix 157	AR4	G	475	506	Right-handed alpha
Helix 158	AR5	G	514	530	Right-handed alpha
Helix 159	AR6	G	530	542	Right-handed alpha
Helix 160	AR7	G	549	573	Right-handed alpha
Helix 161	AR8	G	589	618	Right-handed alpha
Helix 162	AR9	G	624	651	Right-handed alpha
Helix 163	AS1	G	666	672	Right-handed alpha
Helix 164	AS2	G	672	688	Right-handed alpha
Helix 165	AS3	G	691	751	Right-handed alpha
Helix 166	AS4	G	774	798	Right-handed alpha
Helix 167	AS5	G	800	808	Right-handed alpha
Helix 168	AS6	G	830	860	Right-handed alpha
Helix 169	AS7	G	870	893	Right-handed alpha
Helix 170	AS8	G	895	900	Right-handed 310
Helix 171	AS9	G	901	913	Right-handed alpha
Helix 172	AT1	G	915	932	Right-handed alpha
Helix 173	AT2	G	972	975	Right-handed 310
Helix 174	AT3	G	1002	1017	Right-handed alpha
Helix 175	AT4	G	1051	1071	Right-handed alpha

There are 16 sheets in PDB entry 11SO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	814	820	first strand
Strand 2	A	823	829	anti-parallel

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There are 36 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	939	942	first strand
Strand 2	A	947	952	anti-parallel
Strand 3	A	956	960	anti-parallel
Strand 4	A	966	970	anti-parallel
Strand 5	B	979	981	anti-parallel
Strand 6	B	939	942	anti-parallel
Strand 7	B	947	952	anti-parallel
Strand 8	B	956	960	anti-parallel
Strand 9	B	966	970	anti-parallel
Strand 10	C	979	981	anti-parallel
Strand 11	C	939	942	anti-parallel
Strand 12	C	947	952	anti-parallel
Strand 13	C	956	960	anti-parallel
Strand 14	C	966	970	anti-parallel
Strand 15	D	979	981	anti-parallel
Strand 16	D	939	942	anti-parallel
Strand 17	D	947	952	anti-parallel
Strand 18	D	956	960	anti-parallel
Strand 19	D	966	970	anti-parallel
Strand 20	E	979	981	anti-parallel
Strand 21	E	939	942	anti-parallel
Strand 22	E	947	952	anti-parallel
Strand 23	E	956	960	anti-parallel
Strand 24	E	966	970	anti-parallel
Strand 25	F	979	981	anti-parallel
Strand 26	F	939	942	anti-parallel
Strand 27	F	947	952	anti-parallel
Strand 28	F	956	960	anti-parallel
Strand 29	F	966	970	anti-parallel
Strand 30	G	979	981	anti-parallel
Strand 31	G	939	942	anti-parallel
Strand 32	G	947	952	anti-parallel
Strand 33	G	956	960	anti-parallel
Strand 34	G	966	970	anti-parallel
Strand 35	A	979	981	anti-parallel
Strand 36	A	939	942	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	990	997	first strand
Strand 2	A	1038	1045	anti-parallel
Strand 3	A	1027	1032	anti-parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1078	1083	first strand
Strand 2	B	1078	1083	parallel
Strand 3	C	1078	1083	parallel
Strand 4	D	1078	1083	parallel
Strand 5	E	1078	1083	parallel
Strand 6	F	1078	1083	parallel
Strand 7	G	1078	1083	parallel
Strand 8	A	1078	1083	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	814	820	first strand
Strand 2	B	823	829	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	990	997	first strand
Strand 2	B	1038	1045	anti-parallel
Strand 3	B	1027	1032	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	814	820	first strand
Strand 2	C	823	829	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	990	997	first strand
Strand 2	C	1038	1045	anti-parallel
Strand 3	C	1027	1032	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	814	820	first strand
Strand 2	D	823	829	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	990	997	first strand
Strand 2	D	1038	1045	anti-parallel
Strand 3	D	1027	1032	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	814	820	first strand
Strand 2	E	823	829	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	990	997	first strand
Strand 2	E	1038	1045	anti-parallel
Strand 3	E	1027	1032	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	814	820	first strand
Strand 2	F	823	829	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	990	997	first strand
Strand 2	F	1038	1045	anti-parallel
Strand 3	F	1027	1032	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	814	820	first strand
Strand 2	G	823	829	anti-parallel

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There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	990	997	first strand
Strand 2	G	1038	1045	anti-parallel
Strand 3	G	1027	1032	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11SO

Analysis of interatomic Contacts of Structural Units in PDB entry:
11SO