Analysis of interatomic Contacts of Structural Units in PDB entry:
11SX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11SX entry

There are 3 chains in PDB entry 11SX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	LYS 523
B	LEU 2	GLN 456
D	LEU 2	GLN 456

There are 63 helices in PDB entry 11SX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	1	14	Right-handed alpha
Helix 2	AA2	A	22	27	Right-handed alpha
Helix 3	AA3	A	58	65	Right-handed alpha
Helix 4	AA4	A	81	86	Right-handed 310
Helix 5	AA5	A	115	121	Right-handed alpha
Helix 6	AA6	A	123	138	Right-handed alpha
Helix 7	AA7	A	148	153	Right-handed alpha
Helix 8	AA8	A	158	169	Right-handed alpha
Helix 9	AA9	A	188	201	Right-handed alpha
Helix 10	AB1	A	222	225	Right-handed 310
Helix 11	AB2	A	226	237	Right-handed alpha
Helix 12	AB3	A	250	255	Right-handed alpha
Helix 13	AB4	A	271	283	Right-handed alpha
Helix 14	AB5	A	293	307	Right-handed alpha
Helix 15	AB6	A	310	328	Right-handed alpha
Helix 16	AB7	A	331	339	Right-handed alpha
Helix 17	AB8	A	352	363	Right-handed alpha
Helix 18	AB9	A	376	381	Right-handed alpha
Helix 19	AC1	A	382	386	Right-handed 310
Helix 20	AC2	A	414	426	Right-handed alpha
Helix 21	AC3	A	433	437	Right-handed 310
Helix 22	AC4	A	448	460	Right-handed alpha
Helix 23	AC5	A	470	475	Right-handed alpha
Helix 24	AC6	A	496	510	Right-handed alpha
Helix 25	AC7	A	512	516	Right-handed 310
Helix 26	AC8	B	24	33	Right-handed alpha
Helix 27	AC9	B	51	61	Right-handed alpha
Helix 28	AD1	B	83	95	Right-handed alpha
Helix 29	AD2	B	105	112	Right-handed alpha
Helix 30	AD3	B	114	123	Right-handed alpha
Helix 31	AD4	B	145	161	Right-handed alpha
Helix 32	AD5	B	179	192	Right-handed alpha
Helix 33	AD6	B	246	256	Right-handed alpha
Helix 34	AD7	B	268	281	Right-handed alpha
Helix 35	AD8	B	288	295	Right-handed alpha
Helix 36	AD9	B	297	305	Right-handed alpha
Helix 37	AE1	B	306	310	Right-handed 310
Helix 38	AE2	B	319	333	Right-handed alpha
Helix 39	AE3	B	346	357	Right-handed alpha
Helix 40	AE4	B	371	382	Right-handed alpha
Helix 41	AE5	B	390	392	Right-handed 310
Helix 42	AE6	B	393	400	Right-handed alpha
Helix 43	AE7	B	426	446	Right-handed alpha
Helix 44	AE8	B	448	452	Right-handed 310
Helix 45	AE9	D	23	25	Right-handed 310
Helix 46	AF1	D	26	33	Right-handed alpha
Helix 47	AF2	D	51	56	Right-handed alpha
Helix 48	AF3	D	56	61	Right-handed alpha
Helix 49	AF4	D	105	109	Right-handed 310
Helix 50	AF5	D	179	193	Right-handed alpha
Helix 51	AF6	D	224	229	Right-handed alpha
Helix 52	AF7	D	230	234	Right-handed 310
Helix 53	AF8	D	246	256	Right-handed alpha
Helix 54	AF9	D	268	281	Right-handed alpha
Helix 55	AG1	D	290	305	Right-handed alpha
Helix 56	AG2	D	305	310	Right-handed alpha
Helix 57	AG3	D	319	334	Right-handed alpha
Helix 58	AG4	D	347	357	Right-handed alpha
Helix 59	AG5	D	371	382	Right-handed alpha
Helix 60	AG6	D	392	400	Right-handed alpha
Helix 61	AG7	D	416	420	Right-handed 310
Helix 62	AG8	D	426	446	Right-handed alpha
Helix 63	AG9	D	448	452	Right-handed 310

There are 9 sheets in PDB entry 11SX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	441	443	anti-parallel
Strand 3	A	369	370	parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	75	77	first strand
Strand 2	A	142	146	parallel
Strand 3	A	172	176	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	110	111	first strand
Strand 2	B	16	17	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	215	217	first strand
Strand 2	A	262	264	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	464	465	first strand
Strand 2	A	481	482	parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	38	42	first strand
Strand 2	B	99	103	parallel
Strand 3	B	133	135	parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	173	174	first strand
Strand 2	B	238	239	parallel
Strand 3	B	261	262	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	315	316	first strand
Strand 2	B	339	340	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	197	199	first strand
Strand 2	D	171	174	parallel
Strand 3	D	237	239	parallel
Strand 4	D	260	262	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11SX

Analysis of interatomic Contacts of Structural Units in PDB entry:
11SX