Analysis of interatomic Contacts of Structural Units in PDB entry:
11TS

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11TS entry

There are 5 chains in PDB entry 11TS (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 25	ASP 306
B	MET 25	GLU 308
C	MET 25	HIS 311
D	MET 25	ASP 306
E	MET 25	ASP 306

There are 61 helices in PDB entry 11TS. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	64	74	Right-handed alpha
Helix 2	AA2	A	100	115	Right-handed alpha
Helix 3	AA3	A	126	139	Right-handed alpha
Helix 4	AA4	A	167	173	Right-handed alpha
Helix 5	AA5	A	174	178	Right-handed 310
Helix 6	AA6	A	182	197	Right-handed alpha
Helix 7	AA7	A	204	219	Right-handed alpha
Helix 8	AA8	A	222	230	Right-handed 310
Helix 9	AA9	A	236	240	Right-handed 310
Helix 10	AB1	A	242	246	Right-handed 310
Helix 11	AB2	A	263	273	Right-handed alpha
Helix 12	AB3	A	289	291	Right-handed 310
Helix 13	AB4	A	292	306	Right-handed alpha
Helix 14	AB5	B	59	63	Right-handed 310
Helix 15	AB6	B	64	73	Right-handed alpha
Helix 16	AB7	B	100	115	Right-handed alpha
Helix 17	AB8	B	126	135	Right-handed alpha
Helix 18	AB9	B	139	141	Right-handed 310
Helix 19	AC1	B	165	174	Right-handed alpha
Helix 20	AC2	B	182	197	Right-handed alpha
Helix 21	AC3	B	204	219	Right-handed alpha
Helix 22	AC4	B	221	226	Right-handed 310
Helix 23	AC5	B	227	232	Right-handed alpha
Helix 24	AC6	B	236	240	Right-handed 310
Helix 25	AC7	B	242	246	Right-handed 310
Helix 26	AC8	B	263	272	Right-handed alpha
Helix 27	AC9	B	292	306	Right-handed alpha
Helix 28	AD1	C	59	63	Right-handed 310
Helix 29	AD2	C	64	73	Right-handed alpha
Helix 30	AD3	C	100	115	Right-handed alpha
Helix 31	AD4	C	126	139	Right-handed alpha
Helix 32	AD5	C	140	143	Right-handed 310
Helix 33	AD6	C	167	175	Right-handed alpha
Helix 34	AD7	C	182	197	Right-handed alpha
Helix 35	AD8	C	204	219	Right-handed alpha
Helix 36	AD9	C	221	229	Right-handed 310
Helix 37	AE1	C	236	240	Right-handed 310
Helix 38	AE2	C	242	246	Right-handed 310
Helix 39	AE3	C	263	273	Right-handed alpha
Helix 40	AE4	C	289	291	Right-handed 310
Helix 41	AE5	C	292	306	Right-handed alpha
Helix 42	AE6	D	59	63	Right-handed 310
Helix 43	AE7	D	64	74	Right-handed alpha
Helix 44	AE8	D	100	115	Right-handed alpha
Helix 45	AE9	D	126	139	Right-handed alpha
Helix 46	AF1	D	183	197	Right-handed alpha
Helix 47	AF2	D	204	219	Right-handed alpha
Helix 48	AF3	D	222	229	Right-handed 310
Helix 49	AF4	D	242	246	Right-handed 310
Helix 50	AF5	D	262	273	Right-handed alpha
Helix 51	AF6	D	289	291	Right-handed 310
Helix 52	AF7	D	292	306	Right-handed alpha
Helix 53	AF8	E	64	74	Right-handed alpha
Helix 54	AF9	E	100	115	Right-handed alpha
Helix 55	AG1	E	126	138	Right-handed alpha
Helix 56	AG2	E	191	195	Right-handed 310
Helix 57	AG3	E	204	219	Right-handed alpha
Helix 58	AG4	E	236	240	Right-handed 310
Helix 59	AG5	E	242	246	Right-handed 310
Helix 60	AG6	E	263	272	Right-handed alpha
Helix 61	AG7	E	293	306	Right-handed alpha

There are 5 sheets in PDB entry 11TS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	26	32	first strand
Strand 2	A	35	42	anti-parallel
Strand 3	A	77	81	anti-parallel
Strand 4	A	49	53	parallel
Strand 5	A	120	125	parallel
Strand 6	A	143	149	parallel
Strand 7	A	250	255	parallel
Strand 8	A	276	281	parallel

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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	26	32	first strand
Strand 2	B	35	42	anti-parallel
Strand 3	B	77	81	anti-parallel
Strand 4	B	49	53	parallel
Strand 5	B	120	125	parallel
Strand 6	B	143	149	parallel
Strand 7	B	250	255	parallel
Strand 8	B	276	281	parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	32	first strand
Strand 2	C	35	42	anti-parallel
Strand 3	C	77	81	anti-parallel
Strand 4	C	49	53	parallel
Strand 5	C	121	125	parallel
Strand 6	C	146	149	parallel
Strand 7	C	250	255	parallel
Strand 8	C	277	281	parallel

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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	26	32	first strand
Strand 2	D	35	42	anti-parallel
Strand 3	D	77	81	anti-parallel
Strand 4	D	49	53	parallel
Strand 5	D	120	125	parallel
Strand 6	D	143	149	parallel
Strand 7	D	250	255	parallel
Strand 8	D	277	281	parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	26	32	first strand
Strand 2	E	35	42	anti-parallel
Strand 3	E	77	81	anti-parallel
Strand 4	E	49	53	parallel
Strand 5	E	120	125	parallel
Strand 6	E	143	149	parallel
Strand 7	E	250	254	parallel
Strand 8	E	276	280	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11TS

Analysis of interatomic Contacts of Structural Units in PDB entry:
11TS