Analysis of interatomic Contacts of Structural Units in PDB entry:
11TT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 11TT entry

There is 1 chain in PDB entry 11TT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 281
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 11TT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
35 39Right-handed 310
Helix 2
AA2
A
40 49Right-handed alpha
Helix 3
AA3
A
76 91Right-handed alpha
Helix 4
AA4
A
102 115Right-handed alpha
Helix 5
AA5
A
158 172Right-handed alpha
Helix 6
AA6
A
180 195Right-handed alpha
Helix 7
AA7
A
197 207Right-handed 310
Helix 8
AA8
A
210 214Right-handed 310
Helix 9
AA9
A
216 220Right-handed 310
Helix 10
AB1
A
236 238Right-handed 310
Helix 11
AB2
A
239 247Right-handed alpha
Helix 12
AB3
A
263 265Right-handed 310
Helix 13
AB4
A
266 281Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 11TT.

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
12 18anti-parallel
Strand 3
A
53 57anti-parallel
Strand 4
A
25 29parallel
Strand 5
A
96 101parallel
Strand 6
A
119 125parallel
Strand 7
A
224 229parallel
Strand 8
A
250 255parallel
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