Analysis of interatomic Contacts of Structural Units in PDB entry:
11UH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11UH entry

There are 4 chains in PDB entry 11UH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 394	LYS 1233
B	THR 394	ALA 820
C	THR 394	LYS 1233
D	THR 394	ALA 820

There are 74 helices in PDB entry 11UH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	423	436	Right-handed alpha
Helix 2	AA2	A	463	468	Right-handed alpha
Helix 3	AA3	A	482	487	Right-handed alpha
Helix 4	AA4	A	515	519	Right-handed 310
Helix 5	AA5	A	522	544	Right-handed alpha
Helix 6	AA6	A	572	585	Right-handed alpha
Helix 7	AA7	A	595	623	Right-handed alpha
Helix 8	AA8	A	635	642	Right-handed alpha
Helix 9	AA9	A	653	661	Right-handed alpha
Helix 10	AB1	A	664	677	Right-handed alpha
Helix 11	AB2	A	685	696	Right-handed alpha
Helix 12	AB3	A	706	711	Right-handed alpha
Helix 13	AB4	A	712	715	Right-handed 310
Helix 14	AB5	A	743	756	Right-handed alpha
Helix 15	AB6	A	757	766	Right-handed alpha
Helix 16	AB7	A	793	822	Right-handed alpha
Helix 17	AB8	A	1005	1015	Right-handed alpha
Helix 18	AB9	A	1016	1021	Right-handed alpha
Helix 19	AC1	A	1118	1120	Right-handed 310
Helix 20	AC2	A	1121	1148	Right-handed alpha
Helix 21	AC3	A	1158	1189	Right-handed alpha
Helix 22	AC4	A	1209	1232	Right-handed alpha
Helix 23	AC5	B	423	436	Right-handed alpha
Helix 24	AC6	B	462	468	Right-handed alpha
Helix 25	AC7	B	482	489	Right-handed alpha
Helix 26	AC8	B	515	519	Right-handed 310
Helix 27	AC9	B	522	547	Right-handed alpha
Helix 28	AD1	B	572	585	Right-handed alpha
Helix 29	AD2	B	595	617	Right-handed alpha
Helix 30	AD3	B	619	625	Right-handed alpha
Helix 31	AD4	B	653	661	Right-handed alpha
Helix 32	AD5	B	664	675	Right-handed alpha
Helix 33	AD6	B	685	690	Right-handed alpha
Helix 34	AD7	B	706	713	Right-handed alpha
Helix 35	AD8	B	742	755	Right-handed alpha
Helix 36	AD9	B	757	766	Right-handed alpha
Helix 37	AE1	B	793	818	Right-handed alpha
Helix 38	AE2	C	423	436	Right-handed alpha
Helix 39	AE3	C	463	468	Right-handed alpha
Helix 40	AE4	C	482	487	Right-handed alpha
Helix 41	AE5	C	515	519	Right-handed 310
Helix 42	AE6	C	522	544	Right-handed alpha
Helix 43	AE7	C	572	585	Right-handed alpha
Helix 44	AE8	C	595	623	Right-handed alpha
Helix 45	AE9	C	635	642	Right-handed alpha
Helix 46	AF1	C	653	661	Right-handed alpha
Helix 47	AF2	C	664	677	Right-handed alpha
Helix 48	AF3	C	685	696	Right-handed alpha
Helix 49	AF4	C	706	711	Right-handed alpha
Helix 50	AF5	C	712	715	Right-handed 310
Helix 51	AF6	C	743	756	Right-handed alpha
Helix 52	AF7	C	757	766	Right-handed alpha
Helix 53	AF8	C	793	822	Right-handed alpha
Helix 54	AF9	C	1005	1015	Right-handed alpha
Helix 55	AG1	C	1016	1021	Right-handed alpha
Helix 56	AG2	C	1118	1120	Right-handed 310
Helix 57	AG3	C	1121	1148	Right-handed alpha
Helix 58	AG4	C	1158	1189	Right-handed alpha
Helix 59	AG5	C	1209	1232	Right-handed alpha
Helix 60	AG6	D	423	436	Right-handed alpha
Helix 61	AG7	D	462	468	Right-handed alpha
Helix 62	AG8	D	482	489	Right-handed alpha
Helix 63	AG9	D	515	519	Right-handed 310
Helix 64	AH1	D	522	547	Right-handed alpha
Helix 65	AH2	D	572	585	Right-handed alpha
Helix 66	AH3	D	595	617	Right-handed alpha
Helix 67	AH4	D	619	625	Right-handed alpha
Helix 68	AH5	D	653	661	Right-handed alpha
Helix 69	AH6	D	664	675	Right-handed alpha
Helix 70	AH7	D	685	690	Right-handed alpha
Helix 71	AH8	D	706	713	Right-handed alpha
Helix 72	AH9	D	742	755	Right-handed alpha
Helix 73	AI1	D	757	766	Right-handed alpha
Helix 74	AI2	D	793	818	Right-handed alpha

There are 22 sheets in PDB entry 11UH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	398	399	first strand
Strand 2	A	443	444	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	451	452	first strand
Strand 2	A	461	462	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	500	501	first strand
Strand 2	A	704	705	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	503	504	first strand
Strand 2	A	721	722	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1098	1100	first strand
Strand 2	A	1109	1111	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	407	408	first strand
Strand 2	B	421	422	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	452	453	first strand
Strand 2	B	460	461	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	479	480	first strand
Strand 2	B	730	733	anti-parallel
Strand 3	B	497	498	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	500	501	first strand
Strand 2	B	704	705	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	503	504	first strand
Strand 2	B	721	722	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	649	650	first strand
Strand 2	B	682	683	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	398	399	first strand
Strand 2	C	443	444	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	451	452	first strand
Strand 2	C	461	462	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	500	501	first strand
Strand 2	C	704	705	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	503	504	first strand
Strand 2	C	721	722	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1098	1100	first strand
Strand 2	C	1109	1111	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	407	408	first strand
Strand 2	D	421	422	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	452	453	first strand
Strand 2	D	460	461	anti-parallel

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There are 3 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	479	480	first strand
Strand 2	D	730	733	anti-parallel
Strand 3	D	497	498	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	500	501	first strand
Strand 2	D	704	705	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	503	504	first strand
Strand 2	D	721	722	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	649	650	first strand
Strand 2	D	682	683	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11UH

Analysis of interatomic Contacts of Structural Units in PDB entry:
11UH