Analysis of interatomic Contacts of Structural Units in PDB entry:
11UI

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11UI entry

There are 4 chains in PDB entry 11UI (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	ALA 820
B	ASN 10	LYS 817
C	ASN 10	ALA 820
D	ASN 10	LYS 817

There are104 helices in PDB entry 11UI. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	37	Right-handed alpha
Helix 2	AA2	A	54	69	Right-handed alpha
Helix 3	AA3	A	78	80	Right-handed 310
Helix 4	AA4	A	81	93	Right-handed alpha
Helix 5	AA5	A	117	129	Right-handed alpha
Helix 6	AA6	A	147	152	Right-handed alpha
Helix 7	AA7	A	172	186	Right-handed alpha
Helix 8	AA8	A	197	212	Right-handed alpha
Helix 9	AA9	A	252	263	Right-handed alpha
Helix 10	AB1	A	279	302	Right-handed alpha
Helix 11	AB2	A	325	335	Right-handed alpha
Helix 12	AB3	A	348	352	Right-handed 310
Helix 13	AB4	A	384	388	Right-handed 310
Helix 14	AB5	A	424	436	Right-handed alpha
Helix 15	AB6	A	461	469	Right-handed alpha
Helix 16	AB7	A	522	545	Right-handed alpha
Helix 17	AB8	A	575	585	Right-handed alpha
Helix 18	AB9	A	595	625	Right-handed alpha
Helix 19	AC1	A	635	642	Right-handed alpha
Helix 20	AC2	A	655	661	Right-handed alpha
Helix 21	AC3	A	664	676	Right-handed alpha
Helix 22	AC4	A	685	694	Right-handed alpha
Helix 23	AC5	A	708	713	Right-handed alpha
Helix 24	AC6	A	743	756	Right-handed alpha
Helix 25	AC7	A	757	767	Right-handed alpha
Helix 26	AC8	A	792	818	Right-handed alpha
Helix 27	AC9	B	22	37	Right-handed alpha
Helix 28	AD1	B	54	69	Right-handed alpha
Helix 29	AD2	B	78	80	Right-handed 310
Helix 30	AD3	B	81	93	Right-handed alpha
Helix 31	AD4	B	117	129	Right-handed alpha
Helix 32	AD5	B	147	152	Right-handed alpha
Helix 33	AD6	B	172	186	Right-handed alpha
Helix 34	AD7	B	197	212	Right-handed alpha
Helix 35	AD8	B	252	263	Right-handed alpha
Helix 36	AD9	B	279	302	Right-handed alpha
Helix 37	AE1	B	325	335	Right-handed alpha
Helix 38	AE2	B	348	352	Right-handed 310
Helix 39	AE3	B	424	436	Right-handed alpha
Helix 40	AE4	B	461	469	Right-handed alpha
Helix 41	AE5	B	515	519	Right-handed 310
Helix 42	AE6	B	522	547	Right-handed alpha
Helix 43	AE7	B	573	580	Right-handed alpha
Helix 44	AE8	B	597	619	Right-handed alpha
Helix 45	AE9	B	619	625	Right-handed alpha
Helix 46	AF1	B	635	642	Right-handed alpha
Helix 47	AF2	B	655	661	Right-handed alpha
Helix 48	AF3	B	664	676	Right-handed alpha
Helix 49	AF4	B	685	694	Right-handed alpha
Helix 50	AF5	B	708	713	Right-handed alpha
Helix 51	AF6	B	743	756	Right-handed alpha
Helix 52	AF7	B	757	767	Right-handed alpha
Helix 53	AF8	B	793	817	Right-handed alpha
Helix 54	AF9	C	22	37	Right-handed alpha
Helix 55	AG1	C	54	69	Right-handed alpha
Helix 56	AG2	C	78	80	Right-handed 310
Helix 57	AG3	C	81	93	Right-handed alpha
Helix 58	AG4	C	117	129	Right-handed alpha
Helix 59	AG5	C	147	152	Right-handed alpha
Helix 60	AG6	C	172	186	Right-handed alpha
Helix 61	AG7	C	197	212	Right-handed alpha
Helix 62	AG8	C	252	263	Right-handed alpha
Helix 63	AG9	C	279	302	Right-handed alpha
Helix 64	AH1	C	325	335	Right-handed alpha
Helix 65	AH2	C	348	352	Right-handed 310
Helix 66	AH3	C	424	436	Right-handed alpha
Helix 67	AH4	C	461	469	Right-handed alpha
Helix 68	AH5	C	522	545	Right-handed alpha
Helix 69	AH6	C	576	585	Right-handed alpha
Helix 70	AH7	C	595	625	Right-handed alpha
Helix 71	AH8	C	635	642	Right-handed alpha
Helix 72	AH9	C	655	661	Right-handed alpha
Helix 73	AI1	C	664	676	Right-handed alpha
Helix 74	AI2	C	685	694	Right-handed alpha
Helix 75	AI3	C	708	713	Right-handed alpha
Helix 76	AI4	C	743	756	Right-handed alpha
Helix 77	AI5	C	757	767	Right-handed alpha
Helix 78	AI6	C	792	818	Right-handed alpha
Helix 79	AI7	D	22	37	Right-handed alpha
Helix 80	AI8	D	54	69	Right-handed alpha
Helix 81	AI9	D	78	80	Right-handed 310
Helix 82	AJ1	D	81	93	Right-handed alpha
Helix 83	AJ2	D	117	129	Right-handed alpha
Helix 84	AJ3	D	147	152	Right-handed alpha
Helix 85	AJ4	D	172	186	Right-handed alpha
Helix 86	AJ5	D	197	212	Right-handed alpha
Helix 87	AJ6	D	252	263	Right-handed alpha
Helix 88	AJ7	D	279	302	Right-handed alpha
Helix 89	AJ8	D	325	335	Right-handed alpha
Helix 90	AJ9	D	348	352	Right-handed 310
Helix 91	AK1	D	424	436	Right-handed alpha
Helix 92	AK2	D	461	469	Right-handed alpha
Helix 93	AK3	D	515	519	Right-handed 310
Helix 94	AK4	D	522	547	Right-handed alpha
Helix 95	AK5	D	573	580	Right-handed alpha
Helix 96	AK6	D	597	625	Right-handed alpha
Helix 97	AK7	D	635	642	Right-handed alpha
Helix 98	AK8	D	655	661	Right-handed alpha
Helix 99	AK9	D	664	676	Right-handed alpha
Helix 100	AL1	D	685	694	Right-handed alpha
Helix 101	AL2	D	708	713	Right-handed alpha
Helix 102	AL3	D	743	756	Right-handed alpha
Helix 103	AL4	D	757	767	Right-handed alpha
Helix 104	AL5	D	793	817	Right-handed alpha

There are 36 sheets in PDB entry 11UI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	50	first strand
Strand 2	A	12	19	parallel
Strand 3	A	72	75	parallel
Strand 4	A	96	98	parallel
Strand 5	A	110	112	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	191	192	first strand
Strand 2	A	219	220	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	243	246	first strand
Strand 2	A	359	364	anti-parallel
Strand 3	A	367	370	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	339	340	first strand
Strand 2	A	343	344	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	373	first strand
Strand 2	A	381	382	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	399	first strand
Strand 2	A	439	444	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	406	408	first strand
Strand 2	A	421	423	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	491	first strand
Strand 2	A	735	736	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	682	683	first strand
Strand 2	A	646	650	parallel
Strand 3	A	700	705	parallel
Strand 4	A	500	505	anti-parallel
Strand 5	A	720	723	anti-parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	50	first strand
Strand 2	B	12	19	parallel
Strand 3	B	72	75	parallel
Strand 4	B	96	98	parallel
Strand 5	B	110	112	parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	191	192	first strand
Strand 2	B	219	220	parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	243	246	first strand
Strand 2	B	359	364	anti-parallel
Strand 3	B	367	370	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	339	340	first strand
Strand 2	B	343	344	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	373	first strand
Strand 2	B	381	382	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	394	399	first strand
Strand 2	B	439	444	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	406	408	first strand
Strand 2	B	421	423	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	491	first strand
Strand 2	B	735	736	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	682	683	first strand
Strand 2	B	646	650	parallel
Strand 3	B	700	705	parallel
Strand 4	B	500	505	anti-parallel
Strand 5	B	720	723	anti-parallel

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There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	43	50	first strand
Strand 2	C	12	19	parallel
Strand 3	C	72	75	parallel
Strand 4	C	96	98	parallel
Strand 5	C	110	112	parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	191	192	first strand
Strand 2	C	219	220	parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	243	246	first strand
Strand 2	C	359	364	anti-parallel
Strand 3	C	367	370	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	339	340	first strand
Strand 2	C	343	344	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	372	373	first strand
Strand 2	C	381	382	anti-parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	399	first strand
Strand 2	C	439	444	parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	406	408	first strand
Strand 2	C	421	423	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	491	first strand
Strand 2	C	735	736	anti-parallel

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There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	682	683	first strand
Strand 2	C	646	650	parallel
Strand 3	C	700	705	parallel
Strand 4	C	500	505	anti-parallel
Strand 5	C	720	723	anti-parallel

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There are 5 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	43	50	first strand
Strand 2	D	12	19	parallel
Strand 3	D	72	75	parallel
Strand 4	D	96	98	parallel
Strand 5	D	110	112	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	191	192	first strand
Strand 2	D	219	220	parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	243	246	first strand
Strand 2	D	359	364	anti-parallel
Strand 3	D	367	370	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	339	340	first strand
Strand 2	D	343	344	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	372	373	first strand
Strand 2	D	381	382	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	395	399	first strand
Strand 2	D	440	444	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	406	408	first strand
Strand 2	D	421	423	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	490	491	first strand
Strand 2	D	735	736	anti-parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	682	683	first strand
Strand 2	D	646	650	parallel
Strand 3	D	700	705	parallel
Strand 4	D	500	505	anti-parallel
Strand 5	D	720	723	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11UI

Analysis of interatomic Contacts of Structural Units in PDB entry:
11UI