Analysis of interatomic Contacts of Structural Units in PDB entry:
11VW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11VW entry

There are 4 chains in PDB entry 11VW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ASN 10	LEU 1207
B	ASN 10	THR 1208
C	ASN 10	LEU 1207
D	ASN 10	THR 1208

There are144 helices in PDB entry 11VW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	22	36	Right-handed alpha
Helix 2	AA2	A	54	68	Right-handed alpha
Helix 3	AA3	A	81	90	Right-handed alpha
Helix 4	AA4	A	117	129	Right-handed alpha
Helix 5	AA5	A	146	152	Right-handed alpha
Helix 6	AA6	A	172	188	Right-handed alpha
Helix 7	AA7	A	197	212	Right-handed alpha
Helix 8	AA8	A	233	237	Right-handed 310
Helix 9	AA9	A	252	263	Right-handed alpha
Helix 10	AB1	A	279	302	Right-handed alpha
Helix 11	AB2	A	325	331	Right-handed alpha
Helix 12	AB3	A	423	434	Right-handed alpha
Helix 13	AB4	A	461	469	Right-handed alpha
Helix 14	AB5	A	484	489	Right-handed alpha
Helix 15	AB6	A	524	535	Right-handed alpha
Helix 16	AB7	A	616	625	Right-handed alpha
Helix 17	AB8	A	635	642	Right-handed alpha
Helix 18	AB9	A	654	661	Right-handed alpha
Helix 19	AC1	A	664	676	Right-handed alpha
Helix 20	AC2	A	685	697	Right-handed alpha
Helix 21	AC3	A	711	715	Right-handed 310
Helix 22	AC4	A	742	757	Right-handed alpha
Helix 23	AC5	A	757	766	Right-handed alpha
Helix 24	AC6	A	794	809	Right-handed alpha
Helix 25	AC7	A	810	812	Right-handed 310
Helix 26	AC8	A	813	818	Right-handed alpha
Helix 27	AC9	A	1007	1029	Right-handed alpha
Helix 28	AD1	A	1092	1096	Right-handed alpha
Helix 29	AD2	A	1096	1101	Right-handed alpha
Helix 30	AD3	A	1105	1126	Right-handed alpha
Helix 31	AD4	A	1131	1136	Right-handed alpha
Helix 32	AD5	A	1138	1150	Right-handed alpha
Helix 33	AD6	A	1152	1157	Right-handed alpha
Helix 34	AD7	A	1182	1187	Right-handed alpha
Helix 35	AD8	A	1196	1207	Right-handed alpha
Helix 36	AD9	B	22	36	Right-handed alpha
Helix 37	AE1	B	54	69	Right-handed alpha
Helix 38	AE2	B	81	93	Right-handed alpha
Helix 39	AE3	B	117	129	Right-handed alpha
Helix 40	AE4	B	143	155	Right-handed alpha
Helix 41	AE5	B	174	186	Right-handed alpha
Helix 42	AE6	B	197	210	Right-handed alpha
Helix 43	AE7	B	226	230	Right-handed 310
Helix 44	AE8	B	252	264	Right-handed alpha
Helix 45	AE9	B	279	299	Right-handed alpha
Helix 46	AF1	B	325	335	Right-handed alpha
Helix 47	AF2	B	409	414	Right-handed 310
Helix 48	AF3	B	423	437	Right-handed alpha
Helix 49	AF4	B	482	487	Right-handed alpha
Helix 50	AF5	B	522	531	Right-handed alpha
Helix 51	AF6	B	540	545	Right-handed alpha
Helix 52	AF7	B	575	580	Right-handed alpha
Helix 53	AF8	B	597	602	Right-handed alpha
Helix 54	AF9	B	605	620	Right-handed alpha
Helix 55	AG1	B	636	642	Right-handed 310
Helix 56	AG2	B	653	660	Right-handed alpha
Helix 57	AG3	B	664	674	Right-handed alpha
Helix 58	AG4	B	686	695	Right-handed alpha
Helix 59	AG5	B	708	713	Right-handed alpha
Helix 60	AG6	B	742	757	Right-handed alpha
Helix 61	AG7	B	758	763	Right-handed alpha
Helix 62	AG8	B	794	801	Right-handed alpha
Helix 63	AG9	B	813	818	Right-handed alpha
Helix 64	AH1	B	1007	1029	Right-handed alpha
Helix 65	AH2	B	1094	1104	Right-handed alpha
Helix 66	AH3	B	1104	1120	Right-handed alpha
Helix 67	AH4	B	1121	1127	Right-handed alpha
Helix 68	AH5	B	1131	1161	Right-handed alpha
Helix 69	AH6	B	1178	1183	Right-handed alpha
Helix 70	AH7	B	1187	1192	Right-handed alpha
Helix 71	AH8	B	1196	1201	Right-handed alpha
Helix 72	AH9	B	1202	1204	Right-handed 310
Helix 73	AI1	C	22	36	Right-handed alpha
Helix 74	AI2	C	54	68	Right-handed alpha
Helix 75	AI3	C	81	90	Right-handed alpha
Helix 76	AI4	C	117	129	Right-handed alpha
Helix 77	AI5	C	146	152	Right-handed alpha
Helix 78	AI6	C	172	188	Right-handed alpha
Helix 79	AI7	C	197	212	Right-handed alpha
Helix 80	AI8	C	233	237	Right-handed 310
Helix 81	AI9	C	252	263	Right-handed alpha
Helix 82	AJ1	C	279	302	Right-handed alpha
Helix 83	AJ2	C	325	331	Right-handed alpha
Helix 84	AJ3	C	423	434	Right-handed alpha
Helix 85	AJ4	C	461	469	Right-handed alpha
Helix 86	AJ5	C	484	489	Right-handed alpha
Helix 87	AJ6	C	524	535	Right-handed alpha
Helix 88	AJ7	C	616	625	Right-handed alpha
Helix 89	AJ8	C	635	642	Right-handed alpha
Helix 90	AJ9	C	654	661	Right-handed alpha
Helix 91	AK1	C	664	676	Right-handed alpha
Helix 92	AK2	C	685	697	Right-handed alpha
Helix 93	AK3	C	711	715	Right-handed 310
Helix 94	AK4	C	742	757	Right-handed alpha
Helix 95	AK5	C	757	766	Right-handed alpha
Helix 96	AK6	C	794	809	Right-handed alpha
Helix 97	AK7	C	810	812	Right-handed 310
Helix 98	AK8	C	813	818	Right-handed alpha
Helix 99	AK9	C	1007	1029	Right-handed alpha
Helix 100	AL1	C	1092	1096	Right-handed alpha
Helix 101	AL2	C	1096	1101	Right-handed alpha
Helix 102	AL3	C	1105	1126	Right-handed alpha
Helix 103	AL4	C	1131	1136	Right-handed alpha
Helix 104	AL5	C	1138	1150	Right-handed alpha
Helix 105	AL6	C	1152	1157	Right-handed alpha
Helix 106	AL7	C	1182	1187	Right-handed alpha
Helix 107	AL8	C	1196	1207	Right-handed alpha
Helix 108	AL9	D	22	36	Right-handed alpha
Helix 109	AM1	D	54	69	Right-handed alpha
Helix 110	AM2	D	81	93	Right-handed alpha
Helix 111	AM3	D	117	129	Right-handed alpha
Helix 112	AM4	D	143	155	Right-handed alpha
Helix 113	AM5	D	174	186	Right-handed alpha
Helix 114	AM6	D	197	210	Right-handed alpha
Helix 115	AM7	D	226	230	Right-handed 310
Helix 116	AM8	D	252	264	Right-handed alpha
Helix 117	AM9	D	279	299	Right-handed alpha
Helix 118	AN1	D	325	335	Right-handed alpha
Helix 119	AN2	D	409	414	Right-handed 310
Helix 120	AN3	D	423	437	Right-handed alpha
Helix 121	AN4	D	482	487	Right-handed alpha
Helix 122	AN5	D	522	531	Right-handed alpha
Helix 123	AN6	D	540	545	Right-handed alpha
Helix 124	AN7	D	575	580	Right-handed alpha
Helix 125	AN8	D	597	602	Right-handed alpha
Helix 126	AN9	D	605	620	Right-handed alpha
Helix 127	AO1	D	636	642	Right-handed 310
Helix 128	AO2	D	653	660	Right-handed alpha
Helix 129	AO3	D	664	674	Right-handed alpha
Helix 130	AO4	D	686	695	Right-handed alpha
Helix 131	AO5	D	708	713	Right-handed alpha
Helix 132	AO6	D	742	757	Right-handed alpha
Helix 133	AO7	D	758	763	Right-handed alpha
Helix 134	AO8	D	794	801	Right-handed alpha
Helix 135	AO9	D	813	818	Right-handed alpha
Helix 136	AP1	D	1007	1029	Right-handed alpha
Helix 137	AP2	D	1094	1104	Right-handed alpha
Helix 138	AP3	D	1104	1120	Right-handed alpha
Helix 139	AP4	D	1121	1127	Right-handed alpha
Helix 140	AP5	D	1131	1161	Right-handed alpha
Helix 141	AP6	D	1178	1183	Right-handed alpha
Helix 142	AP7	D	1187	1192	Right-handed alpha
Helix 143	AP8	D	1196	1201	Right-handed alpha
Helix 144	AP9	D	1202	1204	Right-handed 310

There are 28 sheets in PDB entry 11VW. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	14	17	first strand
Strand 2	A	72	75	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	221	225	first strand
Strand 2	A	243	245	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	361	364	first strand
Strand 2	A	367	370	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	394	395	first strand
Strand 2	A	439	440	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	490	491	first strand
Strand 2	A	735	736	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	646	648	first strand
Strand 2	A	700	705	parallel
Strand 3	A	500	505	anti-parallel
Strand 4	A	720	723	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1033	1037	first strand
Strand 2	A	1056	1060	anti-parallel
Strand 3	A	1066	1067	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	14	16	first strand
Strand 2	B	72	74	parallel
Strand 3	B	95	98	parallel
Strand 4	B	110	112	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	18	19	first strand
Strand 2	B	49	50	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	245	246	first strand
Strand 2	B	359	360	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	347	first strand
Strand 2	B	353	354	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	396	397	first strand
Strand 2	B	443	444	parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	490	491	first strand
Strand 2	B	735	736	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	497	504	first strand
Strand 2	B	721	731	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	14	17	first strand
Strand 2	C	72	75	parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	221	225	first strand
Strand 2	C	243	245	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	361	364	first strand
Strand 2	C	367	370	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	394	395	first strand
Strand 2	C	439	440	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	490	491	first strand
Strand 2	C	735	736	anti-parallel

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There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	646	648	first strand
Strand 2	C	700	705	parallel
Strand 3	C	500	505	anti-parallel
Strand 4	C	720	723	anti-parallel

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There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1033	1037	first strand
Strand 2	C	1056	1060	anti-parallel
Strand 3	C	1066	1067	anti-parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	14	16	first strand
Strand 2	D	72	74	parallel
Strand 3	D	95	98	parallel
Strand 4	D	110	112	parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	18	19	first strand
Strand 2	D	49	50	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	245	246	first strand
Strand 2	D	359	360	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	346	347	first strand
Strand 2	D	353	354	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	396	397	first strand
Strand 2	D	443	444	parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	490	491	first strand
Strand 2	D	735	736	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	497	504	first strand
Strand 2	D	721	731	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11VW

Analysis of interatomic Contacts of Structural Units in PDB entry:
11VW