Analysis of interatomic Contacts of Structural Units in PDB entry:
11WZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 11WZ entry

There are 6 chains in PDB entry 11WZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	TYR 1004
B	MET 1	TYR 218
T	T -4	C 10
E	MET 1	SER 222
D	ARG 6	SER 222
C	SER 3	SER 3

There are 72 helices in PDB entry 11WZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	44	48	Right-handed alpha
Helix 2	AA2	A	108	118	Right-handed alpha
Helix 3	AA3	A	128	130	Right-handed 310
Helix 4	AA4	A	144	149	Right-handed alpha
Helix 5	AA5	A	209	216	Right-handed alpha
Helix 6	AA6	A	240	254	Right-handed alpha
Helix 7	AA7	A	267	280	Right-handed alpha
Helix 8	AA8	A	331	339	Right-handed alpha
Helix 9	AA9	A	345	354	Right-handed alpha
Helix 10	AB1	A	380	390	Right-handed alpha
Helix 11	AB2	A	439	446	Right-handed alpha
Helix 12	AB3	A	448	471	Right-handed alpha
Helix 13	AB4	A	474	487	Right-handed alpha
Helix 14	AB5	A	497	502	Right-handed alpha
Helix 15	AB6	A	502	514	Right-handed alpha
Helix 16	AB7	A	552	561	Right-handed alpha
Helix 17	AB8	A	576	591	Right-handed alpha
Helix 18	AB9	A	621	644	Right-handed alpha
Helix 19	AC1	A	651	665	Right-handed alpha
Helix 20	AC2	A	666	673	Right-handed alpha
Helix 21	AC3	A	680	703	Right-handed alpha
Helix 22	AC4	A	764	781	Right-handed alpha
Helix 23	AC5	A	837	856	Right-handed alpha
Helix 24	AC6	A	860	883	Right-handed alpha
Helix 25	AC7	A	886	891	Right-handed alpha
Helix 26	AC8	A	907	918	Right-handed alpha
Helix 27	AC9	A	946	950	Right-handed 310
Helix 28	AD1	A	967	981	Right-handed alpha
Helix 29	AD2	A	985	997	Right-handed alpha
Helix 30	AD3	B	16	18	Right-handed 310
Helix 31	AD4	B	19	34	Right-handed alpha
Helix 32	AD5	B	35	37	Right-handed 310
Helix 33	AD6	B	45	49	Right-handed 310
Helix 34	AD7	B	50	55	Right-handed 310
Helix 35	AD8	B	86	101	Right-handed alpha
Helix 36	AD9	B	131	135	Right-handed 310
Helix 37	AE1	B	137	152	Right-handed alpha
Helix 38	AE2	B	187	191	Right-handed 310
Helix 39	AE3	B	193	205	Right-handed alpha
Helix 40	AE4	B	211	214	Right-handed 310
Helix 41	AE5	E	2	6	Right-handed alpha
Helix 42	AE6	E	20	25	Right-handed alpha
Helix 43	AE7	E	36	47	Right-handed alpha
Helix 44	AE8	E	78	104	Right-handed alpha
Helix 45	AE9	E	109	117	Right-handed alpha
Helix 46	AF1	E	144	150	Right-handed alpha
Helix 47	AF2	E	150	159	Right-handed alpha
Helix 48	AF3	E	163	168	Right-handed alpha
Helix 49	AF4	E	203	208	Right-handed 310
Helix 50	AF5	D	20	27	Right-handed alpha
Helix 51	AF6	D	36	47	Right-handed alpha
Helix 52	AF7	D	78	104	Right-handed alpha
Helix 53	AF8	D	108	119	Right-handed alpha
Helix 54	AF9	D	144	150	Right-handed alpha
Helix 55	AG1	D	150	160	Right-handed alpha
Helix 56	AG2	D	163	168	Right-handed alpha
Helix 57	AG3	D	203	208	Right-handed 310
Helix 58	AG4	C	4	16	Right-handed alpha
Helix 59	AG5	C	28	42	Right-handed alpha
Helix 60	AG6	C	107	118	Right-handed alpha
Helix 61	AG7	C	149	159	Right-handed alpha
Helix 62	AG8	C	177	189	Right-handed alpha
Helix 63	AG9	C	249	256	Right-handed alpha
Helix 64	AH1	C	286	298	Right-handed alpha
Helix 65	AH2	C	315	323	Right-handed alpha
Helix 66	AH3	C	330	341	Right-handed alpha
Helix 67	AH4	C	341	350	Right-handed alpha
Helix 68	AH5	C	352	362	Right-handed alpha
Helix 69	AH6	C	364	374	Right-handed alpha
Helix 70	AH7	C	392	396	Right-handed 310
Helix 71	AH8	C	397	406	Right-handed alpha
Helix 72	AH9	C	406	425	Right-handed alpha

There are 26 sheets in PDB entry 11WZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	132	134	first strand
Strand 2	A	139	142	anti-parallel
Strand 3	A	29	35	parallel
Strand 4	A	17	23	anti-parallel
Strand 5	A	2	10	anti-parallel
Strand 6	A	124	126	anti-parallel
Strand 7	A	151	152	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	38	43	first strand
Strand 2	A	83	93	anti-parallel
Strand 3	A	56	67	anti-parallel
Strand 4	A	515	518	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	72	73	first strand
Strand 2	A	568	574	parallel
Strand 3	A	610	616	anti-parallel
Strand 4	A	596	601	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	236	239	first strand
Strand 2	A	197	204	parallel
Strand 3	A	183	191	anti-parallel
Strand 4	A	163	169	anti-parallel
Strand 5	A	258	261	parallel
Strand 6	A	327	330	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	287	first strand
Strand 2	A	294	296	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	300	302	first strand
Strand 2	A	317	319	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	355	362	first strand
Strand 2	A	368	372	anti-parallel
Strand 3	A	415	420	anti-parallel
Strand 4	A	401	410	anti-parallel
Strand 5	A	394	397	anti-parallel
Strand 6	A	429	433	anti-parallel
Strand 7	A	355	362	anti-parallel

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There are 9 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	732	734	first strand
Strand 2	A	711	713	anti-parallel
Strand 3	A	706	707	anti-parallel
Strand 4	A	743	750	anti-parallel
Strand 5	A	754	759	anti-parallel
Strand 6	A	545	550	anti-parallel
Strand 7	A	789	796	anti-parallel
Strand 8	A	809	812	anti-parallel
Strand 9	A	822	823	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	800	802	first strand
Strand 2	A	805	806	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	892	893	first strand
Strand 2	A	929	931	anti-parallel
Strand 3	A	952	953	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	933	935	first strand
Strand 2	A	964	966	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	4	first strand
Strand 2	B	13	15	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	116	120	first strand
Strand 2	B	62	66	parallel
Strand 3	B	154	158	parallel
Strand 4	B	175	179	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	107	108	first strand
Strand 2	B	216	217	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	7	8	first strand
Strand 2	E	212	213	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	35	first strand
Strand 2	E	11	14	anti-parallel
Strand 3	E	53	55	anti-parallel
Strand 4	E	179	181	anti-parallel

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There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	64	72	anti-parallel
Strand 3	E	132	143	anti-parallel
Strand 4	E	120	125	anti-parallel
Strand 5	E	195	197	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	169	170	first strand
Strand 2	E	64	72	anti-parallel
Strand 3	E	132	143	anti-parallel
Strand 4	E	219	221	parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	32	35	first strand
Strand 2	D	11	14	anti-parallel
Strand 3	D	53	55	anti-parallel
Strand 4	D	179	181	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	64	72	anti-parallel
Strand 3	D	132	143	anti-parallel
Strand 4	D	120	125	anti-parallel
Strand 5	D	195	197	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	169	170	first strand
Strand 2	D	64	72	anti-parallel
Strand 3	D	132	143	anti-parallel
Strand 4	D	219	220	parallel

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There are 4 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	170	first strand
Strand 2	C	74	81	anti-parallel
Strand 3	C	196	201	anti-parallel
Strand 4	C	208	210	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	86	first strand
Strand 2	C	126	131	anti-parallel
Strand 3	C	136	142	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	233	239	first strand
Strand 2	C	214	227	anti-parallel
Strand 3	C	263	268	anti-parallel
Strand 4	C	273	274	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	301	304	first strand
Strand 2	C	307	310	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	375	380	first strand
Strand 2	C	383	389	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 11WZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
11WZ